Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01872 ATGGCATCTTCATCCGAACTAAGCCTGGATTACAAACCCCATAGCTATTCCATGCTACTCAAATCTATTGGAGATCAGCACAGTGAACAGACCTACAAGCTCGAAGAACACCTTTCTCGCCTAGAGGAAGAACGTCTGAAGATTGATGCCTTCAAGCGAGAGCTTCCTCTTTGCATGCAACTTCTCGCCAACGCTATGGAGGGTTTAAGGCAGCAACTGCAGACCTTCAGAGGAAATCAAGGTACAAAGCCAGTTCTTGAAGAATTCATACCCATAAAGCATTCAACCTCTGAAAGCTCTGAAAAGGCACCAAATATGTCTGACAAGGCAAATTGGATGACATCTGCTCAACTATGGAGCCAAGCAAGTGAAGGAAGCAAGCCACAATCCACAATCACATCACCCAAAGAATCTGATATTGGCTTTAACGTTAGCCCTAAGCTAGCTTTAGAGAACAAACAGAGGACTGGTGGAGCCTTCCTTCCATTTTCAAAAGAAAGAAACTCGTGCCCTGGCTCTGCATTCCGGGTTCTCCCTGAGCTTGCTCTTGCCTCTGCTGACAAAGAGATGGAGGACAAGAAATCTGCAGAGCCTGAAAATGGAGCATCATGTCCAAAGAGGGAGAATTCTGGCAAAGGAGGCAATAATGGAGTGGTGATTGATCAAGGAAAAGGATCTGCAGCTGCATCTGAGCCACAAACAACCAATACCACCAATAACTCAAACACTGCACAAACACATAGGAAAGCAAGAAGGTGCTGGTCACCAGACTTGCACCGCAGATTTGTGAACGCTCTTCAAATGCTTGGTGGATCTCAAGTAGCCACACCAAAACAAATCAGGGAGCTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTTCAGAAATATAGGCTTCACACTAGGCGACCCAGTCCAAGCATACAACCAGGCGGAGCACCCCCACCGCAGCTCGTAGTTCTAGGAGGGATTTGGGTCCCACCGGAGTATGCCACGGCAGCAGCAGCCAACCCTGCCCTCTATGGCCCACACCCTACCTCCCATGCACCACCACCACACTACTGCACTGCCACCCCTGTGCCCCAAGACTACTACACTGCTACCCCGTCGCAGTCACCGCTGCCACAGCAACCACACCACCACGCACTCCATCATCACCTCCACATGTACAAAACGGCGTCGAACACTCACACCTCGCCGGAGCCTGACGTTCGTAGAGCCGCTGACCGGTCGGAGAGTATTGAAGATGGCAAGTCCGAAAGCAGCAGTTGGAAGGGGGAGAGTGGTGAGAACGAAGGAGACAGAAAAGGATTGGCTGCGCTTAGAGATCAAGATGGGGAGGACAGTAATGGGAGTGACATCACTCTCAAATTTTAG 1389 0.496 MASSSELSLDYKPHSYSMLLKSIGDQHSEQTYKLEEHLSRLEEERLKIDAFKRELPLCMQLLANAMEGLRQQLQTFRGNQGTKPVLEEFIPIKHSTSESSEKAPNMSDKANWMTSAQLWSQASEGSKPQSTITSPKESDIGFNVSPKLALENKQRTGGAFLPFSKERNSCPGSAFRVLPELALASADKEMEDKKSAEPENGASCPKRENSGKGGNNGVVIDQGKGSAAASEPQTTNTTNNSNTAQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSIQPGGAPPPQLVVLGGIWVPPEYATAAAANPALYGPHPTSHAPPPHYCTATPVPQDYYTATPSQSPLPQQPHHHALHHHLHMYKTASNTHTSPEPDVRRAADRSESIEDGKSESSSWKGESGENEGDRKGLAALRDQDGEDSNGSDITLKF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01872 462 MobiDBLite consensus disorder prediction 406 456 - -
Bach2g01872 462 Gene3D - 248 306 - -
Bach2g01872 462 NCBIfam myb-like DNA-binding domain, SHAQKYF class 249 304 IPR006447 GO:0003677
Bach2g01872 462 MobiDBLite consensus disorder prediction 227 249 - -
Bach2g01872 462 MobiDBLite consensus disorder prediction 118 139 - -
Bach2g01872 462 Pfam Myb-like DNA-binding domain 251 302 IPR001005 -
Bach2g01872 462 SUPERFAMILY Homeodomain-like 246 307 IPR009057 -
Bach2g01872 462 FunFam Myb family transcription factor 248 306 - -
Bach2g01872 462 Coils Coil 59 79 - -
Bach2g01872 462 MobiDBLite consensus disorder prediction 188 251 - -
Bach2g01872 462 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 24 429 IPR044787 GO:0003700|GO:0006355
Bach2g01872 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 246 306 IPR017930 -
Bach2g01872 462 Coils Coil 34 54 - -
Bach2g01872 462 MobiDBLite consensus disorder prediction 397 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01872 Bach-Chr2 26694727 26696940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01872 1 462 G2-like Transcription Factor Family AT2G03500 50.312 3.05e-130 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bach2g01872 Myb_DNA-binding 1e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00545 5 3747679 3750196 Bach2g01872 2 26694727 26696940 BWGD
Bach2g01872 2 26694727 26696940 Bach2g01872 2 26694727 26696940 ECH