Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01524 ATGAGAAACTGTCTGCAGCTTCTTCCCTCTCTGCTCTTGTGTCTCTTATTGTTCAGCATTTTATGTTTAGTACAAACAAAATCTTTCATTGAACCATGTAGCTCCTCGGACTCATGCCCTTCTCTTCTCTCTTATGTTTTGCCTTGGGACTCCAAACTCTCTGAAATTGCGTCTCGCTTTCATGTAAACGTTTCTGATATCTTGGCTGCAAACTCTGTCTTCCCAATAGTATCATCACAAGGTAATCAAATTCTCAGGGCAGAATCACTCGTCAAAATACCCATTTCATGTTCATGTGCGGAAGGTATCAGAAGATATATGGTGAACAATTACATCGTTCAGCCAGCTGATACCCTTGAATCTCTCTCTCAAGGATATGGTGGGCTTGTTAGTGCAGACCAGATTATGAGTGTGAACAGTATCAATGCCACAAATCCATTGACAAATGGAGGGAGCTTGGTTATTCCATTGCCTTGCACCTGTTTGAATAATGTCAACAATGGGCAAACCACTGTTTATATGTCATATGTGGTGCAGGCAGGGGAGAGCTTCAACAAGATAGCTTCAGTGTTTGGTACTACTATCAACGAATTGCAGAATATTAATGGGCTAACCCAAGCTATGGTTGAAACAGGAGACATACTAGCTGTTCCCTTTGCAGCATGTTCATCAGCATCTCTGAACTGGTACAATGAGAGTATGATAGTCCCAAATGGCTCATATGCTCTTACTGCCACTAACTGCATCAAATGTTCTTGTGGACCAATGGATCTCATGCTACATTGTGTTCCCTCAGGCCTTGATGTCCCATGCTACAATTTACAGTGCCAAGGATCCAACCTTGTAATTGGGAATGAATATGTGGCACATTCAAAAGCTGGTTGTAATGTAACAAAGTGTGTTTATCGTGGCCATAGGGGCGGCAAAATTTTCAGAAGTATGATGAATTCTTCTTATCTCCAGTGCCCAGATAATAGGAATCAATCTACAGGATCATGTTGGCCATTTTCATCGTCAGCACATCCCATAATCCCTTATGGGACATTGGCTCCAGGCCCATCCCCAATGCCAGTTTCCAAAGCAGATCTGAGTGGAATGCTTGGTGAAGCTACGTTTATCAATTTGTTGCTGCTGCTACTACCACAACTCGTCCCTAATTTTTTCATGTAA 1170 0.4222 MRNCLQLLPSLLLCLLLFSILCLVQTKSFIEPCSSSDSCPSLLSYVLPWDSKLSEIASRFHVNVSDILAANSVFPIVSSQGNQILRAESLVKIPISCSCAEGIRRYMVNNYIVQPADTLESLSQGYGGLVSADQIMSVNSINATNPLTNGGSLVIPLPCTCLNNVNNGQTTVYMSYVVQAGESFNKIASVFGTTINELQNINGLTQAMVETGDILAVPFAACSSASLNWYNESMIVPNGSYALTATNCIKCSCGPMDLMLHCVPSGLDVPCYNLQCQGSNLVIGNEYVAHSKAGCNVTKCVYRGHRGGKIFRSMMNSSYLQCPDNRNQSTGSCWPFSSSAHPIIPYGTLAPGPSPMPVSKADLSGMLGEATFINLLLLLLPQLVPNFFM 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01524 389 CDD LysM 175 205 IPR018392 -
Bach1g01524 389 Pfam LysM domain 111 156 IPR018392 -
Bach1g01524 389 Pfam LysM domain 176 218 IPR018392 -
Bach1g01524 389 Pfam LysM domain 53 72 IPR018392 -
Bach1g01524 389 SUPERFAMILY LysM domain 174 218 IPR036779 -
Bach1g01524 389 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 10 325 - -
Bach1g01524 389 SMART LysM_2 110 156 IPR018392 -
Bach1g01524 389 SMART LysM_2 175 218 IPR018392 -
Bach1g01524 389 Gene3D LysM domain 174 218 IPR036779 -
Bach1g01524 389 CDD LysM 111 155 IPR018392 -
Bach1g01524 389 ProSiteProfiles LysM domain profile. 174 217 IPR018392 -
Bach1g01524 389 ProSiteProfiles LysM domain profile. 109 155 IPR018392 -
Bach1g01524 389 Gene3D LysM domain 109 167 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01524 Bach-Chr1 28827350 28829374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01524 11 323 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 44.620 1.38e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01524 - - gmx:100819382 479.944