Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01369 ATGCGTTTATTTAATTTTCAGCCACCAAATCATCATCATCATCATCCAGCAAATGGCAGTGAAAACCCTCAGCTGTTTCCACCGCTACCTCCACAAACCACCCAAGTGGGAATTGGTGCCGGTTCAATCAGGCCCGGCTCGATGGCTGATCGAGCACGGCTAGCGAAGATACCACCACCGGAGGCCGCTCTCAGGTGTCCTCGCTGTGATTCCACCAACACTAAATTTTGTTACTTCAATAATTACAGCCTCTCGCAACCTCGGCATTTCTGCAAGACATGTCGGCGATACTGGACAAGAGGAGGAGCTCTTAGGAATGTCCCTGTTGGCGGGGGATGCCGTAGGAACAAGAAAAACAAAAGGAGTCGCTCCAAATCGCCAGCAGCCACTGACAAACAGGCCGCAAGTGCAATCCCTTCACCAGCTTCAGGTGGCACCCGCACCACTGAACTTATTGCTCAATTGCCTCAACCATCTAACTTGCCTTTCGTGGCCTCCCCTTTACACAATCTCACTCGCTATGGCGTAGGAAATATGACCCTTAACTTGCCACAAACACAAACTGATCATATGGGCTTTCAAATGGGTAACAATTCAGGTGCGGGAAGTACTATTTTATCTGGTGGAGGAGTGGACAACTGGCGGTTGCAGCAATTTCCTTTCCTAAATAATTTTTTGTCAAGTGCTGGCACTGGTTCTGGTTCTGGTTCATACCCATTTCAAAGTGAAAGTGTTGAAGAACCAGCGTCTAACTTGGTTGGAGTTGGAGATAGTTCACTTGGGAGTTCTAGGGTTACTACTCAGTCGCCAGCAGTTAAATTGGAAGATAATAGAGGGTTAAATTTGTCAAGATCACATCTGAGTATCTCAGAGAATAACCAATACTATCCATGGACTGATTTATCTGGTCTTGCCTCTTCTTCCACTGGCCATCTCTTGTAA 942 0.4703 MRLFNFQPPNHHHHHPANGSENPQLFPPLPPQTTQVGIGAGSIRPGSMADRARLAKIPPPEAALRCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPAATDKQAASAIPSPASGGTRTTELIAQLPQPSNLPFVASPLHNLTRYGVGNMTLNLPQTQTDHMGFQMGNNSGAGSTILSGGGVDNWRLQQFPFLNNFLSSAGTGSGSGSYPFQSESVEEPASNLVGVGDSSLGSSRVTTQSPAVKLEDNRGLNLSRSHLSISENNQYYPWTDLSGLASSSTGHLL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01369 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 51 217 IPR045174 GO:0003700|GO:0006355
Bach13g01369 313 MobiDBLite consensus disorder prediction 108 146 - -
Bach13g01369 313 ProSiteProfiles Zinc finger Dof-type profile. 64 118 IPR003851 GO:0003677|GO:0006355
Bach13g01369 313 ProSitePatterns Zinc finger Dof-type signature. 66 102 IPR003851 GO:0003677|GO:0006355
Bach13g01369 313 MobiDBLite consensus disorder prediction 1 46 - -
Bach13g01369 313 MobiDBLite consensus disorder prediction 128 146 - -
Bach13g01369 313 Pfam Dof domain, zinc finger 63 118 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01369 Bach-Chr13 17791430 17792371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01369 10 312 C2C2-Dof Transcription Factor Family AT3G55370 41.617 2.08e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach13g01369 zf-Dof 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01369 - - gmx:100816635 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01369 13 17791430 17792371 Bach9g00108 9 743108 744448 PCT