Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01313 ATGGATCCTTCAAGTGGACAACACCAGATGTCTAACCAATCACTGGAGAACATGTTAGTTTGCTCGAAAGCGCAGCAGGAGAGGAAGCCAAGGCCTCAGCCAGAACAAGCTCTGAAATGCCCAAGATGTGATTCAACTAACACAAAGTTCTGCTACTACAACAATTACAGTCTTTCTCAGCCAAGATATTTCTGCAAGTCTTGCAGGAGATATTGGACCAAAGGTGGAACACTGAGGAATGTTCCAGTGGGTGGAGGGTGCAGGAAGAACAAAAGGTCGTCATCTGCATCATCAAAGAGAGCTCAAGATCAAACCTTCACACCCAATACCAACCCACTCTCTAACCTCCCTCCATTATCCTATGACTCTGGTGACCTCACCCTTGCATTATGTAGGCTCCAAAAGCAATCGTGTGGGCAGTTGGGCTATGATGAACATGATCTTTCTGTTTTGGGAAATCCCACAAACACCCATTGTGATATTATTGGAAACCCAGGAATGAACTCATCATCCTCTAACCCTGGATTTTTAGATGCACTGCGAAGTGGGTTCCTAGAAAACCAGAATAATCTTCAGAATCTCTACTATGGGTATGGAAACGGGGACTTGGGAGAGGTGGATAATGGGAATGCTTGTGGGGTTGGGGTTAGTGGAGAGATGAGTCTGCCTTATGATCAAGAAATGAGTAATGCCACAACTCAAGCAGTGACCATGACTACCATGAAACAAGAATTGTGTAATGCCAGAGAACAAAGTGAAAATAAGGTCTTGTGGGGTTTCCCATGGCAACACAATGGAGACACAAACATGGGTGAACTTGATTCAGTAAGAGCAAGTTGGAACGGTTTTACACCATCCTGGCATGGCCTTCTCAATAGTCCCCTAATGTAG 891 0.4489 MDPSSGQHQMSNQSLENMLVCSKAQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSASSKRAQDQTFTPNTNPLSNLPPLSYDSGDLTLALCRLQKQSCGQLGYDEHDLSVLGNPTNTHCDIIGNPGMNSSSSNPGFLDALRSGFLENQNNLQNLYYGYGNGDLGEVDNGNACGVGVSGEMSLPYDQEMSNATTQAVTMTTMKQELCNAREQSENKVLWGFPWQHNGDTNMGELDSVRASWNGFTPSWHGLLNSPLM 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01313 296 MobiDBLite consensus disorder prediction 97 118 - -
Bach13g01313 296 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Bach13g01313 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 202 IPR045174 GO:0003700|GO:0006355
Bach13g01313 296 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Bach13g01313 296 MobiDBLite consensus disorder prediction 83 118 - -
Bach13g01313 296 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01313 Bach-Chr13 17314794 17316358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01313 1 296 C2C2-Dof Transcription Factor Family AT2G28510 40.367 1.07e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach13g01313 zf-Dof 6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01313 - - gmx:100799737 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01313 13 17314794 17316358 Bach13g01313 13 17314794 17316358 ECH
Bach13g01313 13 17314794 17316358 Bach9g00157 9 1105694 1107577 PCT