LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g00577	ATGACGTTGGCCTTCGCAACAAAAAGCCGACGCTTGGCAAATGGATCCTGGAATCTTATCGCTCATTCCTCACATTTGCTCTCCAAGCAATCCCCCATTCCTCTCCTCTCTCGCCAGATAAGTATTACTGCCAGGAGTGTTACTTCTCAGCTTACTAGTACTGGTCTGTTGCGGAATCAAGGCCTTATTGGAGGGAAATGGGTTGATGCTTATGATGGAAAAACTCTGAAGGTTTATAATCCAGCAACTGGGGAACCTATAGTGGATATCGCATATATGGGTGGAAAAGAGACAATCGATGCAATATCTTCAGCCTATGATGCATATAGATCTTGGAGCAAAACCACTGCTTCCGAGAGGAGCAAACTTCTGAGGAAATGGTATGATTTGCTGATGGCACATAGAGAAGAGCTTGCACAACTTATAACTTTGGAGCAAGGAAAACCTCTAAAAGAATCAATAGCCGAGATTAACTATGGGGCTGGTTTTATTGAGTTTTCAGCAGAGGAGGCAAAACGAGTATACGGGGATATAATTCCTGCACCTCTACCTGATCGACGCTTGTTTGTCTTAAAGCAGCCTGTAGGGGTTGTTGGTGCAATCACACCTTGGAACTTTCCCCTGGCTATGATTACCCGAAAGGTTGGCCCAGCTCTTGCATGTGGCTGTACAGCGGTCATAAAACCCTCTGAACTTACTCCATTAACAGCTCTGGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCAGCGGGTGTCGTGAATGTTGTTATGGGAAATGCACCTGATATTGGAGACACATTAATTGCAAGTCCACAGGTACGGAAGATCACATTTACAGGGTCAACAGCTGTTGGAAAGAAGTTGCTGGCAGGTTCTGCTGGGACAGTTAAAAAAGTATCTCTGGAACTAGGTGGTAATGCACCTTGCGTAATATTTGATGATGCTGACTTGGATGTGGCAGTAAACGGAACGGTTGCAGCAAAGTTCCGTAATAGTGGACAAACATGTGTTTGTGCAAATAGAATTCTTGTGCAAGAAGGTATCTATGAGAAATTTGCAAATGCTTTGGTCAATGCTGTTCAAAATATGAAAGTTGGGGATGGCTTTGGTGAAGGTGTGGTTCAGGGTCCTCTAATCAATGAAGCTGCAGTAAAAAAGGTTGAGTCCTTGATTCAAGATGCTACCTCAAAGGGGGCAAAACTGATTCATGGGGGTCAAAGACATGGCCTTGGATTAACTTTTTATGAACCAACAGTCATCACTGATGTCAAAAATGAGATGCTGATGTCAAGGGAGGAAGTATTTGGACCTGTTGCACCACTTTTGCGGTTCAAAACCGAGGAGGAAGCTATCAGGATAGCTAATGACACCAATGCAGGGTTGGGTTCATACATATTTACAAATAGCATCCAACGGTCGTGGCGCGTTGCCGAGGCTCTTGAATATGGGCTCGTGGGTGTGAATGAAGGCGTCATTTCAACTGAGGTGGCTCCATTTGGTGGTTTTAAGCAATCTGGCCTCGGAAGGGAAGGGTCCAAATATGGAATGGATGAATATTTGGAAATCAAGTATGTTTGCTTGGGAAACATGAACAAAGAGTGA	1605	0.4436	MTLAFATKSRRLANGSWNLIAHSSHLLSKQSPIPLLSRQISITARSVTSQLTSTGLLRNQGLIGGKWVDAYDGKTLKVYNPATGEPIVDIAYMGGKETIDAISSAYDAYRSWSKTTASERSKLLRKWYDLLMAHREELAQLITLEQGKPLKESIAEINYGAGFIEFSAEEAKRVYGDIIPAPLPDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTAVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDTLIASPQVRKITFTGSTAVGKKLLAGSAGTVKKVSLELGGNAPCVIFDDADLDVAVNGTVAAKFRNSGQTCVCANRILVQEGIYEKFANALVNAVQNMKVGDGFGEGVVQGPLINEAAVKKVESLIQDATSKGAKLIHGGQRHGLGLTFYEPTVITDVKNEMLMSREEVFGPVAPLLRFKTEEEAIRIANDTNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMNKE	534

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g00577	534	FunFam	Aldehyde dehydrogenase, putative	498	524	-	-
	Bach13g00577	534	NCBIfam	succinate-semialdehyde dehydrogenase	78	524	IPR010102	GO:0009013\|GO:0009450
	Bach13g00577	534	Pfam	Aldehyde dehydrogenase family	67	526	IPR015590	GO:0016491
	Bach13g00577	534	CDD	ALDH_F5_SSADH_GabD	78	528	-	-
	Bach13g00577	534	ProSitePatterns	Aldehyde dehydrogenases cysteine active site.	330	341	IPR016160	GO:0016491
	Bach13g00577	534	FunFam	Succinate-semialdehyde dehydrogenase I	73	318	-	-
	Bach13g00577	534	PANTHER	SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL	53	531	-	-
	Bach13g00577	534	SUPERFAMILY	ALDH-like	51	532	IPR016161	GO:0016491
	Bach13g00577	534	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	306	495	IPR016163	GO:0016620
	Bach13g00577	534	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	73	520	IPR016162	GO:0016491
	Bach13g00577	534	ProSitePatterns	Aldehyde dehydrogenases glutamic acid active site.	302	309	IPR029510	GO:0016491
	Bach13g00577	534	FunFam	Succinate-semialdehyde dehydrogenase I	306	495	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g00577	Bach-Chr13	11183902	11192636	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach13g00577	13	11183902	11192636	Bach13g00577	13	11183902	11192636	ECH