Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00403 ATGGTGAAAAGGCAGAATCAAGATGAACCTATAGACGGCCACCCACCAAAATTTCTCCCCGTCCTTCCTCTCAATCGACCCTTCACATCCTCTCTTTGGGTTTGGTTTTCTTTGCAATGGATTTTTGAACGTGGGATAGTCATCATTTCAGTGCTGGTGGTTGCATGTATTAGCATGGCATCTAGTAATCCATTCTTTGATGACATACGGAGCACATCTGATGTTGATCCTTCTCAAAATGAAGAGTTGCTTGATGTCAGTGAACTTGTGGATGATCATTCACAAAGGTCCCTAAAACCTAATGTATCTGTTTCAAGCAGTGTTTGTGAGCTTTTAGAGTGTCCTGTGTGCTTGAACGCCATGTATCCTCCAATCCATCAGTGTTCAAATGGTCATACTTTATGCTCAGGTTGCAAACCCCGGGTGCACAACCGATGTCCTACTTGTAGGCATGAGCTCGGCAATATCAGATGTCTGGCACTGGAGAAGATTGCTGCATCATTGGAACTTCCCTGTAGATATCAAAATTATGGGTGCATCGGCATATATCCATATTACAGCAAGCTAAAACATGAATCTCAATGTGTATACAGACCCTATAACTGTCCATATGCTGGATCAGAGTGCACTGTCGTTGGTGATATACCTTATCTGGTGTCTCATCTGAAAGATGATCACAAGGTGGACATGCACAGTGGTAGCACCTTTAACCATCGCTATGTCAAATCAAATCCACAAGAAGTTGAAAATGCTACATGGATGTTAACGGTTTTCAGTTGCTTTGGTCAGTATTTTTGTCTACATTTTGAAGCTTTTCAGCTCGGAATGGCTCCTGTCTACATAGCATTCTTACGGTTTATGGGTGATGATAATGAGGCAAAGAACTATAGCTACAGTCTTGAGGTGGGTGGTAATGGTAGGAAAATGATTTGGCAGGGGGTGCCTAGAAGCATTAGGGACAGCCACAGGAAGGTCCGTGACAGTTTTGACGGCCTCATCATTCAACGCAACATGGCTTTGTTCTTTTCTGGAGGCGACCGAAAGGAATTGAAGCTAAGGGTTACAGGGAGGATTTGGAAAGAACAATGA 1089 0.4325 MVKRQNQDEPIDGHPPKFLPVLPLNRPFTSSLWVWFSLQWIFERGIVIISVLVVACISMASSNPFFDDIRSTSDVDPSQNEELLDVSELVDDHSQRSLKPNVSVSSSVCELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKIAASLELPCRYQNYGCIGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPYLVSHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00403 362 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 93 361 - -
Bach13g00403 362 SUPERFAMILY TRAF domain-like 167 359 - -
Bach13g00403 362 FunFam E3 ubiquitin-protein ligase SINAT3 166 222 - -
Bach13g00403 362 CDD RING-HC_SIAHs 112 150 - -
Bach13g00403 362 FunFam E3 ubiquitin-protein ligase SINAT5-like 72 165 - -
Bach13g00403 362 FunFam E3 ubiquitin-protein ligase SINAT5-like 223 355 - -
Bach13g00403 362 ProSiteProfiles Zinc finger RING-type profile. 114 150 IPR001841 -
Bach13g00403 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 165 IPR013083 -
Bach13g00403 362 Pfam Seven in absentia protein family 156 355 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bach13g00403 362 CDD Sina 228 356 - -
Bach13g00403 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 166 222 IPR013083 -
Bach13g00403 362 ProSiteProfiles Zinc finger SIAH-type profile. 167 227 IPR013010 GO:0008270
Bach13g00403 362 SUPERFAMILY RING/U-box 113 155 - -
Bach13g00403 362 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 223 355 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00403 Bach-Chr13 9148152 9152436 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00403 13 9148152 9152436 Bach9g01242 9 9905034 9906746 BWGD
Bach13g00403 13 9148152 9152436 Bach13g00403 13 9148152 9152436 ECH