Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00401 ATGCAAATATCGCCGTTAATGGAGTCTTTGGTTCTTAAACTCCATGAGATCTCAGCCGTTAAATTTGGCAACTTCAAGCTGAAATCTGGCATCTCCTCGCCAATCTATATAGACCTTCGCCTTATTGTATCATATCCTTCTTTGCTGCAGCAAATCTCCCAAACTCTAATTTCCTCAGTCCCTTCCACTTCCTATGATATTGTCTGTGGTGTCCCTTATACTGCTCTACCCATTGCTACTTGTGTTTCTGTCACTCAGAACATTCCTATGGTTATGCGCCGCAAGGAAATCAAAGACTACGGGACTGCTAAAGCAATTGAAGGTGATTTTAAGGTTGGCCAAACTTGCTTAATTATTGAGGATCTAGTTACTAGTGGCACATCAGTTTTGGAAACTGCTGCACCACTGCGAGCTGCAGGGTTGAAGGTTAGTGATGCTGTTGTTTTGATTGACAGAGAGCAAGGTGGTAGAGAGAATTTGGAGGAGAATGGGATCAGGCTGCATGCAATTATTAAATTGACTGAAATAGTGAAAATTTTGAGAGGAAAAGGAAAGCTTAATGAGGAAATGGAAGGCATTGTTATGAAATTTTTAGAGGTGAATCAGAAGGTTGCTGCTTTGACAAATGTGGAGAAGCCTGCAGCTAAGATCAAGGCTTTGTCATTTGGGGAGAGGGCAAAGTTGTCCAAGAATCCAACCGGTAAGAGGTTGTTTGAGATAATGATTGAGAAGGAGAGCAATCTGTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTATTTGAAATTGCTGAAAAGGTTGGACCTGAGATATGCTTGCTGAAAACTCACGTGGATATTTTTCCAGATTTCACTCCTGATTTCGGTGCTAAGCTTCGCTCGATTGCAGAAAAATATAACTTTTTAATCTTTGAGGATCGTAAATTTGCTGACATTGGTAACACAGTGATTATGCAGTATGAAGGAGGTATCTTCCGTATATTGGAGTGGGCTGATATAGTGAATGCTCACATTATCTCTGGTCCTGGAATTGTGGATGGATTGAAATTGAAGGGCTTACCTCGTGGTAGGGGTCTGTTGCTACTCGCTGAAATGAGTTCAGCTGGCAACCTTGCCAAGGGAGATTATACTGCTGCTGCAGTGAAGATTGCTGAGGATCATTCTGATTTTGTTATTGGCTTCATCTCAGTCAATCCAGCATCATGGCCCGGGGCACCCATAAATCCTTCTTTCATCCAGGCAACTCCTGGAGTTCAAATGGTGACTGGTGGGGATGCTTTAGGGCAGCAATATAACACTCCCCATTCTGTAATCTATGATAGGGGCAGCGACATTATAATCGTTGGCCGTGGCATTATAAAGGCAGCAAATCCAGCTGAGGCAGCTCGTGAATACCGTCTGCAAGGATGGAATGCATATTTGGCCAAGTGCACTTGAGCTCTATATGCTAAGTCTATACATAGATGAGTTAAGTTTTATGTTTTCTATGGTACTTATTTCACTTGAAGCCTGGAGGAAGGTCAGGTCTTGAGTTCTATATGATGCAAATCTCCCTTTCCTGCTAATATATGGGAAAAAACAAACAAACAAACAAACTCCATGTGTTGGTAAATTGAATATTGCAAGAGATGCCATGAAATTTTTG 1645 0.4188 MQISPLMESLVLKLHEISAVKFGNFKLKSGISSPIYIDLRLIVSYPSLLQQISQTLISSVPSTSYDIVCGVPYTALPIATCVSVTQNIPMVMRRKEIKDYGTAKAIEGDFKVGQTCLIIEDLVTSGTSVLETAAPLRAAGLKVSDAVVLIDREQGGRENLEENGIRLHAIIKLTEIVKILRGKGKLNEEMEGIVMKFLEVNQKVAALTNVEKPAAKIKALSFGERAKLSKNPTGKRLFEIMIEKESNLCLAADVGTAAELFEIAEKVGPEICLLKTHVDIFPDFTPDFGAKLRSIAEKYNFLIFEDRKFADIGNTVIMQYEGGIFRILEWADIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDALGQQYNTPHSVIYDRGSDIIIVGRGIIKAANPAEAAREYRLQGWNAYLAKCT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00401 478 CDD OMP_decarboxylase_like 248 465 - -
Bach13g00401 478 Gene3D Aldolase class I 217 478 IPR013785 -
Bach13g00401 478 Pfam Phosphoribosyl transferase domain 63 158 IPR000836 -
Bach13g00401 478 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 303 316 IPR018089 GO:0004590|GO:0006207
Bach13g00401 478 NCBIfam orotate phosphoribosyltransferase 14 176 IPR004467 GO:0004588
Bach13g00401 478 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 6 477 - -
Bach13g00401 478 CDD PRTases_typeI 66 172 IPR000836 -
Bach13g00401 478 SMART OMPdecase_2 247 465 IPR001754 GO:0004590|GO:0006207
Bach13g00401 478 NCBIfam orotidine-5'-phosphate decarboxylase 248 466 IPR014732 GO:0004590|GO:0044205
Bach13g00401 478 SUPERFAMILY PRTase-like 6 189 IPR029057 -
Bach13g00401 478 Gene3D - 2 212 IPR029057 -
Bach13g00401 478 SUPERFAMILY Ribulose-phoshate binding barrel 220 474 IPR011060 -
Bach13g00401 478 FunFam Uridine monophosphate synthetase 4 207 - -
Bach13g00401 478 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 246 465 IPR001754 GO:0004590|GO:0006207
Bach13g00401 478 FunFam Uridine monophosphate synthetase 217 478 - -
Bach13g00401 478 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 234 IPR023031 GO:0004588|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00401 Bach-Chr13 9139265 9142032 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00401 13 9139265 9142032 Bach9g01243 9 9908076 9910709 BWGD
Bach13g00401 13 9139265 9142032 Bach13g00401 13 9139265 9142032 ECH