Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00399 ATGCCTCAAAAATTTGTTGCAGAGAAGGAGTTGCCATTTGACCCCTTGAATACCAAAATTGTAGCAGCATTTCGCGATTTGGGTTTGAAATATTGGAGGGTGGAGATGTCTATAGAGCATGATGATTCTGATATAAAGGATGTCGAAGCTGCAGGGTCATCTTGCCTTTATGATCTCTTTTGTTCTGAGACACCAAATTTGCAGTCCGAACGAGAACAATGGATTGCTTCTGGTCCACAACAAAGGCTAGATAATCTATTGCATCAAGCTGGGAATAAGTTCTGTGCTGATTGTGGAGCTCCAGAACCAAAATGGGTGTCTTCTAGTATTGGAGTATTCATCTGTATCAAGTGTTCTGGAGTACATAGAAGCCTGGGAGTCCATATATCAAAGGTTCTATCAGTGAAACTAGATGAGTGGACAGACGAACAAGTTGATGAATTGGTGAAACTGGGTGGAAATACGGTAGTAAATATGAAGTATGAAGCTTGTATCCCAAGTAATATAAAGAAACCAAAAGCATCTTCCTCCAATGAGGAGCGGTCTGATTTTATTAGGAGAAAATATGAGCAGTTACAGTTTTTGAATTCTGAGGAAAACTTGTGCTGTCCCTTTCCACCAACTCACGGGAGAAATTCTCTGCCAGACAAGAAACAATCTGATAAACAAACAACCAGACATCGAATTGGGCATTCACTTCGTAACAGCTGGGGAAGTAACAGTTGGGGAAGAAAAGATTCTGACCGTAAGACTACAAAGAAGTGCAACTCCTTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTAGTCAAAGGCACCAACTTGGCTGTCCGGGATATGAAATCTAGTGATCCTTACGTTCTTCTTTCTATGGGTCAGCAATCAGTAAGGACACGCGTCATAAAGAACAGTTTGAATCCTATCTGGAATGAAAGCTTAATGCTGTCAATTCCAGAGAACATTCCTCCTCTTAAAGTGATTGTATACGACAAAGATACATTCACAACTGATGATTTCATGGGTGAGGCTGAAATAGACATTCATCCATTACTTCAAGCTGCAAAGGCGTATGAAACATCCACAATCAACGAGTCCATGCAGCTTGGATCTTGGGTTGCATGCACAGACAACACCCTCATTAGAGATGGTATCATCTCCCTAGAAGATGGGAAGGTCAGACAAATGATCTCACTGAGGCTACAGAATGTTGAAAGAGGTGTTCTAGAAATTGAGCTTGAGTGTCTTCCTCTCACTCAATAG 1269 0.4113 MPQKFVAEKELPFDPLNTKIVAAFRDLGLKYWRVEMSIEHDDSDIKDVEAAGSSCLYDLFCSETPNLQSEREQWIASGPQQRLDNLLHQAGNKFCADCGAPEPKWVSSSIGVFICIKCSGVHRSLGVHISKVLSVKLDEWTDEQVDELVKLGGNTVVNMKYEACIPSNIKKPKASSSNEERSDFIRRKYEQLQFLNSEENLCCPFPPTHGRNSLPDKKQSDKQTTRHRIGHSLRNSWGSNSWGRKDSDRKTTKKCNSLAGMVEFVGLIKVNVVKGTNLAVRDMKSSDPYVLLSMGQQSVRTRVIKNSLNPIWNESLMLSIPENIPPLKVIVYDKDTFTTDDFMGEAEIDIHPLLQAAKAYETSTINESMQLGSWVACTDNTLIRDGIISLEDGKVRQMISLRLQNVERGVLEIELECLPLTQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00399 422 SMART arf_gap_3 80 199 IPR001164 GO:0005096
Bach13g00399 422 Gene3D Arf GTPase activating protein 62 202 IPR038508 -
Bach13g00399 422 Gene3D C2 domain 265 419 IPR035892 -
Bach13g00399 422 FunFam stromal membrane-associated protein 1 isoform X1 66 200 - -
Bach13g00399 422 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 264 422 - -
Bach13g00399 422 MobiDBLite consensus disorder prediction 214 228 - -
Bach13g00399 422 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 263 359 IPR035892 -
Bach13g00399 422 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 76 422 IPR044518 GO:0005096|GO:0005543
Bach13g00399 422 PRINTS HIV Rev interacting protein signature 111 128 IPR001164 GO:0005096
Bach13g00399 422 PRINTS HIV Rev interacting protein signature 92 111 IPR001164 GO:0005096
Bach13g00399 422 PRINTS HIV Rev interacting protein signature 132 153 IPR001164 GO:0005096
Bach13g00399 422 Pfam Putative GTPase activating protein for Arf 81 196 IPR001164 GO:0005096
Bach13g00399 422 ProSiteProfiles C2 domain profile. 249 363 IPR000008 -
Bach13g00399 422 SMART C2_3c 267 362 IPR000008 -
Bach13g00399 422 CDD C2_ArfGAP 265 409 - -
Bach13g00399 422 ProSiteProfiles ARF GTPase-activating proteins domain profile. 80 202 IPR001164 GO:0005096
Bach13g00399 422 MobiDBLite consensus disorder prediction 206 251 - -
Bach13g00399 422 CDD ArfGap 83 189 - -
Bach13g00399 422 Pfam C2 domain 267 358 IPR000008 -
Bach13g00399 422 SUPERFAMILY ArfGap/RecO-like zinc finger 81 196 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00399 Bach-Chr13 9118084 9124435 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00399 13 9118084 9124435 Bach9g01245 9 9917262 9922557 BWGD