Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00300 TGTGCACGTGTCAGCCGGACCCCAAGTTTGTGATAGGTATCCATCTCCACCCCCATATATTTTGCACATCACCTAACTCCAACCACTCCCCTTTTCTATCTCCTGCATCTTGTCGAATCAGAGAAAACTCCAAAATTCAATTCGGATCCTAAACGGATAATAGGAGGCCTGGATTTCTTCTTATGCAGTGTGATTGCCCAAGCACAACAATGGGAACCGAGAGTCCAGCAAATTACATGTACATAGGACGGAATTTCAGCGATTTGAGTGTGAACGATAGTACATCTTCTGCTTTTAGCCACTGCAGCAGTGACAAATCCGGCGATTTTCCTGGAGCTTCAGCGGAAAGCCGGCGGCTACTGTATGCTTGTGCTTCTGAGAATTCTGATGATCTTATTCGTCAGCTAGTCTCTGATCTCGAGTCCTGTTCGATTGACGAGCAAAAGCAAGCCGCCATAGAGATCAGACTGCTCGCCAAGAATAAACCCGAATATCGCCTAAAAATTGCGAAAGTCGGCGCAATTAAGCCGTTAATCTCCCTTATATCTTCACCCGATCTTCAGTTGCAAGAGAACGGCGTTACATCGATTTTGAACCTTTCACTGTGCGACGAGAATAAGGAGCTTATAGCTTCATCGGGAGCCATTAAGCCTCTGGTTCGAGCCCTCAAAACAGGGACCTCAACAGCTAAAGAGAACGCAGCATGTGCTTTGCTTCGTCTCTCTCAAATAGAGGAGAACAAGATTGCGATTGGAAGGTCAGGAGCCATTCCCCTCTTAGTGAACCTTCTAGAGAACGGAGGTTTCCGCGGGAAGAAAGACGCAGCGACGGCGCTGTATTCTCTTTGTTCAGTGAAGGAGAACAAGATCAGGGCGGTGCAAGCGGGAATCATGAAGCCGTTAGTGGAATTAATGGCGGATTTTGGGTCAAACATGTTAGATAAGTCAGCGTACGTTCTAAACGTGCTGGTATCGGTACCGGAAGCGAGGACATCGTTGGTGGAGGAAGGAGGTATTCCAGTGTTGGTGGAGATTATCGAGGTGGGGTCGCAGAGACAGAAAGAAATCGCTGTGGTTGTCTTGTTGCAGATTTGCGAGGACAGCGTGGCCCATTGTCACATGGTGGTTCGCGAAGGAGCAATTCCTCCTTTGATTGCTGTGTCGCAGTCCGGCACGAATCGCGCCAAGCAAAAGGCAGAGACCCTCATAGAGCTTCTACGGCAACCAAGATCCGGCAACGCCGCTGCCCGTACGTCAGACGTGTCAGCATAATCCTCACA 1279 0.4894 MQCDCPSTTMGTESPANYMYIGRNFSDLSVNDSTSSAFSHCSSDKSGDFPGASAESRRLLYACASENSDDLIRQLVSDLESCSIDEQKQAAIEIRLLAKNKPEYRLKIAKVGAIKPLISLISSPDLQLQENGVTSILNLSLCDENKELIASSGAIKPLVRALKTGTSTAKENAACALLRLSQIEENKIAIGRSGAIPLLVNLLENGGFRGKKDAATALYSLCSVKENKIRAVQAGIMKPLVELMADFGSNMLDKSAYVLNVLVSVPEARTSLVEEGGIPVLVEIIEVGSQRQKEIAVVVLLQICEDSVAHCHMVVREGAIPPLIAVSQSGTNRAKQKAETLIELLRQPRSGNAAARTSDVSA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00300 362 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 112 154 IPR000225 GO:0005515
Bach12g00300 362 SUPERFAMILY ARM repeat 69 345 IPR016024 -
Bach12g00300 362 SMART arm_5 142 182 IPR000225 GO:0005515
Bach12g00300 362 SMART arm_5 224 264 IPR000225 GO:0005515
Bach12g00300 362 SMART arm_5 307 347 IPR000225 GO:0005515
Bach12g00300 362 SMART arm_5 101 141 IPR000225 GO:0005515
Bach12g00300 362 SMART arm_5 183 223 IPR000225 GO:0005515
Bach12g00300 362 SMART arm_5 265 305 IPR000225 GO:0005515
Bach12g00300 362 Gene3D - 51 251 IPR011989 -
Bach12g00300 362 Gene3D - 252 359 IPR011989 -
Bach12g00300 362 Pfam Armadillo/beta-catenin-like repeat 185 223 IPR000225 GO:0005515
Bach12g00300 362 Pfam Armadillo/beta-catenin-like repeat 102 140 IPR000225 GO:0005515
Bach12g00300 362 Pfam Armadillo/beta-catenin-like repeat 143 181 IPR000225 GO:0005515
Bach12g00300 362 PANTHER U BOX DOMAIN-CONTAINING 71 346 - -
Bach12g00300 362 FunFam RING-type E3 ubiquitin transferase 61 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00300 Bach-Chr12 1994775 1996498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00300 23 354 U-box Gene Family AT2G23140 47.181 6.45e-91 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02184 3 28917963 28919472 Bach12g00300 12 1994775 1996498 BWGD