Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00258 ATGCAAGGGCATAGGGGTACACTTGGTTCTTTGCCTGAAACCTTAGAATTTGATTATGGATCTTCATCAAGTAATGCTACTGTGGATCAGCAGATTTGCTGGAATAATATGAGGAATCCTGCAGAGAACCGAATACCTGAATATATACTTGGACCTGGTGATATGAACTCACCGTATGTGAATTCTGTAAATCATGAATGGCAGAATTTTGGTGGATGGAGCTTAGGTGGGCCAAGTTCTGCTAATACACAGGATGAGATTGATCATCATGAGCAGAAAAGAGAACTTGGATGGTCTTCCTCAGTAAGTAGTGGTGCTGTACCTGGTCCAAGGTTGGAAGGAAGGCGCTTTGGACCAACTAATGTTCTTCCATTGGACAGTGCCAATGCAAGTACCATGTACAGGCGTGGCTCTCATTCACATCCTGTGTCACAGAATTTTAACTTAAATGCCGGTTTGGTGGACAATGACAGTACTACTAGCCAACAAGCAGAGCATCCTAGCATGCACAAGTCCAGTGGATCTGTAAACGAGTGTCCTCCACCACCCATTGGTTCTACTCCTTTTCTGCTTCCTTCTGAAGGTAACAGCTTCTTGGAAGAAGATAATGACGGAAGGCCAGGATGTTCTATGGATACTCGCCGTGTATCTTGTAAAAGAAAGGCTGTTGATGGAAGTGTTGGACAATCTTCTGATGGTGGAAGCTCTAGCTACAATCATGATGCAGATAGTAGTTCCTGGCCCACTCTTCCTACTCAGGGTAATGCAGGCAGTAGCTTATGCAGATCAGCTTCACCAGAACAGGTAAATGCCAGACTAGGCCTAGGTGTGGGGGATGACTCCTCTGAAGACCTTCCTGATTCAAATGGTTTGGGGAGCTCAGAAAGCTTCCACCGAAATTTCCGTTTGAGGATGAATCCTTCAAACCAATATTCCGTTCCACCCACTACATTCTCGACGGGGAATGTGGTTAGGCATTCTAATGTTTCATCCTTTCCAATGTCGCAAAGATTTCCTGTTGATAATTCTCCGGAGTTGAGGTCAGCACCAGCAATGGATAACATGATTTCCCAAAGCCAGCCCCTTGTAGTTCATGTTCCTGCTTTGCCAAGGAATGCACAATCGTTTAGGTGGAGTGGTGGCTCTAGCTCAAGAAACAGCCATTCATCAAGCTCAGTTATTTGTGCAGACAGAGATAGTGTACAACATGAGGAATCAAGCTCAAGAAATATGCCTAGAAACTTGCTAGAGCAACCAGTGTTTGTACCTGCAACTGATTTAAGAAGTTTGGTTCGAAATCCAACAATTAGAGCTTCAAGTAGTGCAAATTTGAGTATTTCAGGTAATGTCGCTTCTTCATCACGGACTGGATCTAGTTCTGCTGTCAATCCTTCATCTGCCTCAAACTGGGTTTCTCGTCCTAATCCTCCACAATACCCACGGAGGTTATCTGAATATGTTCGTCGATCATTGTTTTCTCCTGGTTCTGAGGCTGCTGCAGGTCAGAGCAATAATTTGCGCTCTGGTCCTACAGTGTCATCTGATGGTAGGATTCTAGCTTCTGGTGCTGGTGCTGGTAATCAGGGACACAATCAGTCACATCTGAGATCATCTTCATGGATAGAGAGACAAGGTGATGCTGAATTTGGAATTCCATATTCATTGCGTACTTTGGCTGTTGCTGGTGAAGGAAGTAGTAGAATTGTATCTGAGCTTCGCAATGTGTTGGGCCTCAGGCGTAGGAGTGGGAGCCTGCGATTTGAGGATGTTATGATCCTTGACCAGTCAGTATTTTCTGGAATGGCTGATCTTCATGATAGGCACAGGGATATGAGACTTGATGTTGATAATATGTCTTACGAGGAGTTATTGGCATTGGAAGAGCGTATTGGAAATGTGAGTACCGGATTAAGTGAGGAAACGGTATTGAAACTTCTGAAACAGAAGAAGTATTCAGTTGAAACAGGATCCCAGCTTGAGGCAGAACCCTGCTGTGTTTGTCAGGAGGAGTATAATGATGATGATGATATTGGAACGCTTGATTGCGGGCATGATTACCATACCGACTGTATTAAAAAGTGGTTAATGCACAAGAATCTGTGTCCCATTTGCAAGACAGCGGGCCTGGCAACATGA 2136 0.4443 MQGHRGTLGSLPETLEFDYGSSSSNATVDQQICWNNMRNPAENRIPEYILGPGDMNSPYVNSVNHEWQNFGGWSLGGPSSANTQDEIDHHEQKRELGWSSSVSSGAVPGPRLEGRRFGPTNVLPLDSANASTMYRRGSHSHPVSQNFNLNAGLVDNDSTTSQQAEHPSMHKSSGSVNECPPPPIGSTPFLLPSEGNSFLEEDNDGRPGCSMDTRRVSCKRKAVDGSVGQSSDGGSSSYNHDADSSSWPTLPTQGNAGSSLCRSASPEQVNARLGLGVGDDSSEDLPDSNGLGSSESFHRNFRLRMNPSNQYSVPPTTFSTGNVVRHSNVSSFPMSQRFPVDNSPELRSAPAMDNMISQSQPLVVHVPALPRNAQSFRWSGGSSSRNSHSSSSVICADRDSVQHEESSSRNMPRNLLEQPVFVPATDLRSLVRNPTIRASSSANLSISGNVASSSRTGSSSAVNPSSASNWVSRPNPPQYPRRLSEYVRRSLFSPGSEAAAGQSNNLRSGPTVSSDGRILASGAGAGNQGHNQSHLRSSSWIERQGDAEFGIPYSLRTLAVAGEGSSRIVSELRNVLGLRRRSGSLRFEDVMILDQSVFSGMADLHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLSEETVLKLLKQKKYSVETGSQLEAEPCCVCQEEYNDDDDIGTLDCGHDYHTDCIKKWLMHKNLCPICKTAGLAT 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00258 711 MobiDBLite consensus disorder prediction 496 515 - -
Bach12g00258 711 MobiDBLite consensus disorder prediction 377 397 - -
Bach12g00258 711 MobiDBLite consensus disorder prediction 199 221 - -
Bach12g00258 711 MobiDBLite consensus disorder prediction 377 414 - -
Bach12g00258 711 ProSiteProfiles Zinc finger RING-type profile. 664 705 IPR001841 -
Bach12g00258 711 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 627 708 IPR013083 -
Bach12g00258 711 SUPERFAMILY RING/U-box 653 706 - -
Bach12g00258 711 MobiDBLite consensus disorder prediction 446 478 - -
Bach12g00258 711 Pfam Ring finger domain 664 705 IPR001841 -
Bach12g00258 711 MobiDBLite consensus disorder prediction 228 266 - -
Bach12g00258 711 MobiDBLite consensus disorder prediction 446 475 - -
Bach12g00258 711 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 214 709 IPR045191 GO:0061630
Bach12g00258 711 FunFam E3 ubiquitin-protein ligase MBR2 632 709 - -
Bach12g00258 711 MobiDBLite consensus disorder prediction 133 295 - -
Bach12g00258 711 SMART ring_2 664 704 IPR001841 -
Bach12g00258 711 MobiDBLite consensus disorder prediction 75 120 - -
Bach12g00258 711 MobiDBLite consensus disorder prediction 133 175 - -
Bach12g00258 711 MobiDBLite consensus disorder prediction 495 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00258 Bach-Chr12 1733417 1736487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00258 1 711 C3H Transcription Factor Family AT2G15530 34.228 6.17e-85 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02232 3 29233026 29245591 Bach12g00258 12 1733417 1736487 BWGD
Bach12g00258 12 1733417 1736487 Bach12g00258 12 1733417 1736487 ECH