Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00187 ATGGAGCTAATGGTTCAGTGTAGTTCATGCACGCTCTCCAGATTCCATTGTAAGCTTCGATTCACCGTCTTTGTTTTCGAGATTGTATTGATATTGGCATGGTTGGAAGCCACCAATGCAAGACTCCAAGAACACCAACTGCAATGGGGTGGCCTGGAAAGGAGAAGCGATAGTGTTGCATCACACTCTTGCATACATGACCAGATACTGGAACAGAGAAAGCGACCTGGTCGCAAGGTGTATTCGGTTACACCACAGGTTTATGAGCCTGGTCTGTCAAAACCCCTTCAACATAAAGGTAGGGCCTTACTTGGAGTGTTGATGTCATCAGGGAGTCTAAACGACGCAAAGCAACCTATTAGGATATACCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGAGATTGTCGTAAAATTGGTGATATTGTCAAACTTGGTGAACCCCCCATGACTTCTCTTCATGGTTTCCCTTCCTGTAATCCTCATGGTGATCCTCCAATCTTTGGTGATTGTTGGTATAACTGTACTTCAGAAGATATTTCAGGAGAGGACAAAAAACGTTGGCTACGCAAGGCATTGGGTCAGACAGCTGACTGGTTTAGGAGAGCATTAGCTGTTGAGCCAGTCAAGGGGAATTTGCGCTTAAGTGGATATTCTGCATGTGGGCAAGATGGAGGCGTGCAGCTCCCTCGTGACTATGTTGAAGAGGGTGTCTCTGATGCCGACTTGGTACTTCTGGTGACAACAAGACCTACAACTGGGAACACTCTTGCTTGGGCTGTGGCGTGTGAACGGGATCAATGGGGACGTGCAATAGCTGGACATGTAAATGTTGCTCCTCGTCATTTGACAGCTGAGGCAGAGACCTTACTTTCAGCTACCCTTATACATGAGGTTATGCATGTTCTTGGTTTTGATCCGCATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGGCGTCGAAATCAGGTTACTGAACAAGTCGTGGATGAAAAGCTTGGACGGATGGTAATTCGTGTAGTGCTTCCACGGGTTGTCATGCATTCACGATATCATTATGGGGCATTCTCAGAAAACTTTACTGGTTTAGAGCTGGAAGATGGGGGTGGACGTGGCACATCAGGATCTCACTGGGAAAAAAGGCTTCTGATGAATGAGATTATGACTGGATCTGTGGATACCAGATCTGTAGTTTCGAAAATGACATTGGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGTATGGCAGACCATCTTGATTGGGGTCGCAACCAAGGTACTGAATTTGTTACCTCCCCTTGCCATCTCTGGAAAGGGGCCTACCATTGCAACACAACACAGTTGTCTGGCTGCACATATAACAGGGAGGCAGAGGGATATTGCCCGATTGTAACATATAGTGGAGACCTCCCTCAGTGGGCTCGTTATTTTCCACAAGCTAATAAAGGTGGACAATCCTCATTGGCAGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGACACTAACAGTGCACGAGCACCTGATAGAATGCTGGGTGAAGCCCGCGGGAGTAACTCTAGGTGTATGGCCTCTTCACTAGTACGGACAGGATTTGTAAGAGGGTCTTTGGCACAGGGAAATGGTTGTTATCAGCACAGGTGTATCAATAATTCTTTAGAGGTGACAGTGGATGGCATCTGGAAAGTTTGTCCTCAAGCCGGAGGGCCCATTCAGTTCCCTGGCTTTAATGGTGAATTAATATGCCCTTCATATCACGAACTCTGTAGCACATATCCAGTTGTTTTAGCAGGGCAATGTCCCAATGCTTGTAATTTAAATGGAGATTGTGTTGATGGAAGGTGCCACTGTTTTCTAGGATTTCATGGTCATGATTGCAGTAGACGTTGCTGCCCCAGCAACTGCAATGGCAATGGCAAGTGCCTCTCCAATGGGATATGTGAGTGTAAAAACGGGTATACAGGCATCGACTGTTCCACTGCTGTCTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTACGCTGGATACACATGCCAAAATAGCTCCATGCTCGTGTCCAGTCTTTATGTGTGCAAAAATGTACTGGGAAATGACATGTCCGGACAACATTGTGCACCCAGTGAACCAAGTATACTGCAGCAGCTAGAAGAAGTGGTTGTCATGCCTAATTACCACCGGTTATTCCCTGGTGGTGCTAGAAAATTATTTAACATATTTGGCAGCTCCTATTGTGACGAGGCTGCTAAGCGATTAGCCTGCTGGATATCAATCCAGAAGTGTGACAAGGATGGTGACAACAGGCTCCGAGTATGTCATTCAGCGTGTCAGTCATATAATCTTGCATGTGGAGCTTCACTTGACTGCACAGACCAAACCCTGTTTAGCAGTGAGGGAGGTCAGGGTCAGTGCACTGGCTCCGGTGAGATGAAATCGTCATGGTTTAATCGCTTGCGAAGTAGTTTCTCATTTAGAAATAGTTCATTGAAAGAAATATCTGTAAGATATAAACAGCTTCAACTTTAATTCGTTTTCCTTTTTTGGAGGGCTTTGGATTGTAATGTCTCCAGGGCTTACCGTAGGGAAAGATGGGCATGTAACGCCATAGATTTAGGGATTGCTTCCTCATCCAAAATTGTTTAGGAAAAATTGGATGAGTGGTCGGTATTGGGCTTTCGAAGAGGAAAGCCTTTTCAAGAGAAAATTGGGAATGTATCGTAACAAAGGGTAAAAAGGAAAAAAACAAAAAAAGAATTCCAGATGGTTATGAGATCTTCGGCCGAAGGCTTTGAAGGGAAAAACCCAAAGTAAA 2872 0.4495 MELMVQCSSCTLSRFHCKLRFTVFVFEIVLILAWLEATNARLQEHQLQWGGLERRSDSVASHSCIHDQILEQRKRPGRKVYSVTPQVYEPGLSKPLQHKGRALLGVLMSSGSLNDAKQPIRIYLNYDAVGHSPDRDCRKIGDIVKLGEPPMTSLHGFPSCNPHGDPPIFGDCWYNCTSEDISGEDKKRWLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRDYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVVDEKLGRMVIRVVLPRVVMHSRYHYGAFSENFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADHLDWGRNQGTEFVTSPCHLWKGAYHCNTTQLSGCTYNREAEGYCPIVTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEARGSNSRCMASSLVRTGFVRGSLAQGNGCYQHRCINNSLEVTVDGIWKVCPQAGGPIQFPGFNGELICPSYHELCSTYPVVLAGQCPNACNLNGDCVDGRCHCFLGFHGHDCSRRCCPSNCNGNGKCLSNGICECKNGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLVSSLYVCKNVLGNDMSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCTDQTLFSSEGGQGQCTGSGEMKSSWFNRLRSSFSFRNSSLKEISVRYKQLQL 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00187 861 Gene3D Leishmanolysin , domain 2 313 438 - -
Bach12g00187 861 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 59 818 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Bach12g00187 861 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 115 601 - -
Bach12g00187 861 Gene3D Leishmanolysin domain 3 442 500 - -
Bach12g00187 861 FunFam Peptidase M8, leishmanolysin 113 303 - -
Bach12g00187 861 ProSitePatterns EGF-like domain signature 2. 655 666 IPR000742 -
Bach12g00187 861 PRINTS Leishmanolysin (M8) metalloprotease family signature 401 430 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Bach12g00187 861 PRINTS Leishmanolysin (M8) metalloprotease family signature 248 277 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Bach12g00187 861 FunFam Teneurin transmembrane protein 2 607 637 - -
Bach12g00187 861 ProSitePatterns EGF-like domain signature 1. 655 666 IPR000742 -
Bach12g00187 861 FunFam leishmanolysin-like peptidase isoform X2 314 438 - -
Bach12g00187 861 Gene3D Leishmanolysin domain 4 502 597 - -
Bach12g00187 861 FunFam leishmanolysin-like peptidase isoform X2 441 500 - -
Bach12g00187 861 FunFam leishmanolysin-like isoform X2 502 597 - -
Bach12g00187 861 Gene3D Laminin 638 669 - -
Bach12g00187 861 Gene3D Laminin 607 636 - -
Bach12g00187 861 Pfam EGF-like domain 639 666 IPR013111 -
Bach12g00187 861 Pfam Leishmanolysin 174 598 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Bach12g00187 861 Gene3D - 114 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00187 Bach-Chr12 1291086 1297912 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02302 3 29683480 29690353 Bach12g00187 12 1291086 1297912 BWGD
Bach12g00187 12 1291086 1297912 Bach12g00187 12 1291086 1297912 ECH