LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach12g00136	ATGCAGAAAGCAAGCATAGGAGGGGTGGATCAGGAGAGGAAGCAGGTGAAGAAGTCAGCGCAGGCTAGCTCCAGAAAGGGTTGTATGAGAGGGAAAGGAGGCCCTGAAAATGCCAGTTGCACCTACAAAGGAGTGCGACAGAGAACTTGGGGGAAATGGGTCGCTGAGATCCGTGAACCCAATCGTGGTGCTCGTCTCTGGCTGGGGACATTTGAGACTTCCCATGAAGCTGCTTTGGCTTATGATGCTGCTGCACGTAAGCTCTATGGATCTGATGCCAAGCTCAATCTCCCTGAACTCTCTGTCAACATGAATTCTCACTATCCACCACCCTCTTCCGCCATTGCTGCCCCCTGCACCCAGATTCCACAAATGACAAACCAGAATCAGAACCAGAACCAGCATCAGCAGACTCTGCCTCATCAGCTTCAGCTTCAGCTTCAACAAAACGTGCCACTAAGTCCAACTTTTTCTCTGGATACCACTCCAATCTCAATGGCTACTCACCAAGTTGGACCAATATATACCGGTGAGTGTATCATGACTGTTCCCTTTGAGACTAACACTACCAAGCCAGCAATGGAAACCAGCTCCAAACCCAACCAAAACGAGGACATCGACTTTCGTCCATTCTGGGGGACAATGAATGAGAGCCTCCCTTTCTTGGATGACTCTATCTGGGCAGAGGCTGCCATGTCTGTAGATTTACCTCTAATGGCCGAAGCTGGAATTTTCACTGCTGGGACAGGGAATTGCTTTGCAGATGCCACTGCCTTGGACATTCTTCACTCTCCTTGGTGCATATGA	807	0.4981	MQKASIGGVDQERKQVKKSAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGSDAKLNLPELSVNMNSHYPPPSSAIAAPCTQIPQMTNQNQNQNQHQQTLPHQLQLQLQQNVPLSPTFSLDTTPISMATHQVGPIYTGECIMTVPFETNTTKPAMETSSKPNQNEDIDFRPFWGTMNESLPFLDDSIWAEAAMSVDLPLMAEAGIFTAGTGNCFADATALDILHSPWCI	268

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach12g00136	268	ProSiteProfiles	AP2/ERF domain profile.	41	98	IPR001471	GO:0003700\|GO:0006355
	Bach12g00136	268	Pfam	AP2 domain	41	90	IPR001471	GO:0003700\|GO:0006355
	Bach12g00136	268	Gene3D	AP2/ERF domain	41	99	IPR036955	GO:0003700\|GO:0006355
	Bach12g00136	268	FunFam	Ethylene-responsive transcription factor 2	40	99	-	-
	Bach12g00136	268	CDD	AP2	40	100	IPR001471	GO:0003700\|GO:0006355
	Bach12g00136	268	PRINTS	Ethylene responsive element binding protein signature	42	53	IPR001471	GO:0003700\|GO:0006355
	Bach12g00136	268	PRINTS	Ethylene responsive element binding protein signature	64	80	IPR001471	GO:0003700\|GO:0006355
	Bach12g00136	268	SUPERFAMILY	DNA-binding domain	41	98	IPR016177	GO:0003677
	Bach12g00136	268	PANTHER	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	11	199	-	-
	Bach12g00136	268	SMART	rav1_2	41	104	IPR001471	GO:0003700\|GO:0006355
	Bach12g00136	268	MobiDBLite	consensus disorder prediction	1	40	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach12g00136	Bach-Chr12	957109	957915	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-ERF	Bach12g00136		AP2	8.8e-15	CL0081

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach3g02365	3	30080319	30086579	Bach12g00136	12	957109	957915	BWGD
	Bach12g00136	12	957109	957915	Bach12g00136	12	957109	957915	ECH