LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach12g00122	ATGAACTTAACTCGGTCCCGGTTGTCGAATTTAATATCTAGAATGGCGGAAGAGATTAGCAAGGGCGACTTAGGATCATCTGCTACAAGCGCCGCAAAAACCAGACGTTTCTGGCCTTCTGTTCTCCGTTGGATTCCCACTTCCACCGATCACATCATCGCTGCTGAGAAACGACTTCTCTCTCTTGTCAAGACTCCCTATGTTCAGGAACAGGTCAATATAGGCTCTGGGCCACCTGGGTCAAAAGTTAGATGGTTTCGTTCATCAAGCAACGAGCCAAGATTTATTAATACTGTTACATTTGACAGCAAAGATGATTCTCCAACACTTGTAATGGTTCATGGATATGCTGCTTCCCAGGGTTTCTTCTTCCGTAACTTTGATGCTCTTGCCAGTCATTTTAGAGTCATTGCTATTGATCAACTTGGTTGGGGTGGATCAAGCAGGCCTGACTTTACATGCAGAAGCACTGAAGAAACTGAGGCATGGTTCATTGACTCTTTTGAGGAATGGAGAAAAGCAAAAAACCTTACCAATTTTATATTACTAGGACATTCTTTTGGTGGTTATGTTGCAGCTAAATATGCGCTCAAGCACCCTGAGCACATACAGCACTTGATTTTGGTGGGATCTGCTGGATTTACATCGGAATCAGATTCCAAGTCTGAGTGGATTACACGTTTCAGAGCAACATGGAAAGGAGTAATTCTGAATCATCTTTGGGAATCTAATTTTACACCTCAGAAGGTCGTCAGAGGATTTGGTCCATGGGGTCCAGATCTAGTCCGCAGGTACACAAGTGCTAGATTTGGTACACATTCAACGGGGGACATGTTAACCGAAGAGGAATCAAGATTGCTGACAGATTACGTTTATCATACTTTAGCAGCCAAAGCTAGCGGAGAGCTGTGCTTAAAATACATTTTTGCTTTTGGAGCCTTTGCTAGGATGCCCCTTCTTCAGAGTGCCTCAGAGTGGAAGGTGCCAACCACTTTCATATACGGTTTCCAGGACTGGATGAACTATCAGGGGGCCCAAGAAGCTCGCAAGCACATGAAAGTTCCATGTGAAATCATTAGGGTTCCTCGGGCTGGGCATTTTGCGTTCCTTGACAATCCAACAGGCTTCCATTCGGCGGTGCTTTACGCTTGTAGAAAGCTTCTTTCTCCGTACCCTGACAATGAACCCTTTCCTGAAGGGTTAACATCTGCGTAGGGTATAATTTTTTGTTCGAGTCATATTCTTACCCATACTGTTTTATTTTTTTATTTTATTTTTTATTTTTTTCTTAAAAATTAGATTCCATAATTGAATGAAACTCTGCGTCTTGCTTCAGTAAAATGGAATTTGTCTGTCAATAGACGGATTGGGAATTTATCCTTTGTATAAATTAGTAAACAGAAATTTCATTTCATTGTTGAAACATGTTGACAAAGAGTCTGTATATTTCATTTTCCC	1458	0.4177	MNLTRSRLSNLISRMAEEISKGDLGSSATSAAKTRRFWPSVLRWIPTSTDHIIAAEKRLLSLVKTPYVQEQVNIGSGPPGSKVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALASHFRVIAIDQLGWGGSSRPDFTCRSTEETEAWFIDSFEEWRKAKNLTNFILLGHSFGGYVAAKYALKHPEHIQHLILVGSAGFTSESDSKSEWITRFRATWKGVILNHLWESNFTPQKVVRGFGPWGPDLVRRYTSARFGTHSTGDMLTEEESRLLTDYVYHTLAAKASGELCLKYIFAFGAFARMPLLQSASEWKVPTTFIYGFQDWMNYQGAQEARKHMKVPCEIIRVPRAGHFAFLDNPTGFHSAVLYACRKLLSPYPDNEPFPEGLTSA	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach12g00122	404	PRINTS	Alpha/beta hydrolase fold signature	182	195	IPR000073	-
	Bach12g00122	404	PRINTS	Alpha/beta hydrolase fold signature	196	209	IPR000073	-
	Bach12g00122	404	PRINTS	Alpha/beta hydrolase fold signature	133	148	IPR000073	-
	Bach12g00122	404	PRINTS	Epoxide hydrolase signature	133	148	IPR000639	GO:0003824
	Bach12g00122	404	PRINTS	Epoxide hydrolase signature	361	383	IPR000639	GO:0003824
	Bach12g00122	404	PRINTS	Epoxide hydrolase signature	328	344	IPR000639	GO:0003824
	Bach12g00122	404	PRINTS	Epoxide hydrolase signature	196	209	IPR000639	GO:0003824
	Bach12g00122	404	PANTHER	RE40534P-RELATED	41	382	-	-
	Bach12g00122	404	Pfam	alpha/beta hydrolase fold	108	373	IPR000073	-
	Bach12g00122	404	SUPERFAMILY	alpha/beta-Hydrolases	97	381	IPR029058	-
	Bach12g00122	404	Gene3D	alpha/beta hydrolase	94	384	IPR029058	-
	Bach12g00122	404	FunFam	Probable 1-acylglycerol-3-phosphate O-acyltransferase	94	384	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach12g00122	Bach-Chr12	856763	861228	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach3g02378	3	30186771	30190482	Bach12g00122	12	856763	861228	BWGD
	Bach12g00122	12	856763	861228	Bach12g00122	12	856763	861228	ECH