Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01276 TTCGCTTTGATTTATCCGTTTACAGTCCAATTGAACTTTGTCTGAACTCCGATTTATCGTCGTTTCAACTCCGATCATCCACCACGCACCATGGCCGCGTCGCCCTCGTCGTCGTCTGCAGCGGCCACTACCAATATCATGCTCGCCATCTTCGAGAAGAAGACGAGCCAAATCGATCTCTATCGACCTCTTCGCAACTACGTCGCTTTCCATTACTCCGAACGCGAGGCCCAGAACCTCGAAGACGATCTTCAAACGCTTAAGCAACTTCGTAGCGACCTCGAACGCCATTCTGATCCTTCCCTGCCCTCTCGTCGAGACCTCCTTCAATCCTATTACAAAGCTCTTTGCTTGGTCGAGACCCGTTTTCCAATTTCTCCTGATCAGGATCACGTCAACACTCTCAGCTTCGTCTGGTTCGATGCGTTTAAGCCCAAACAGAAGGCTACCCAGCAGAGTATTCACCTGGAAAAGGCTGCTGTCTTGTTCAATTTGGGCGCTGTTTATAGTCAGATTGGGTTGTCTTATGATCGGAATACTGTTGATGGTCGGAGGCAGGCGTCCCGTGCGTTCATTACAGCTGCTGGGTCTTTTGCTTACCTGAAAGATAATGCCTCCATGAAAGTGTCAATTGGGGGTTCCACGACAGTGGATTTGTCAGTGGAGTGTGCTGGGATGTTGGAGAGGTTGATGCTGGCTCAGGCACAGGAGTGTGTATTTGAGAATACCATTGCAAAAGGGAGTACCCCGGGTGTTTGTGCCAAGATCTCCAGGCAGGTGGGGCTGTACTATGAGGAAGCTTTAGCTTCACTAAATGTTGCACCTTTAAGCCAGCATTTTGATAAGGCTTGGATAGCTCATGTACAGTTAAAAGCAGCTCTATTCTATGGAGAAGCTTGCTATAGGTATGGGCTTGAGCTACATGAGAAAGAAGAGATAGCAGAGGAGATTGCACGGTTGAGAAGTGGGGTCACTGCACTAACTGAGGCAAAGAAAAACTCTAAGGGTGCTGCAGCACAAATTCTTGATGCAATCAGCAAGTTAGAGGCCAATATTAACCGAAACCTAGAAAGGGCTGGGAAGGAGAATGATAGAGTTTACTTCATGAGGGTTCCAAACCCCAATACCTTACCACCTCTTCCAGCATTTTCGATGGTGAAGTCAATGGCGATGAATGAGGTATTAGATGCAAGTAAAGAGAAGATGTTTGCAAGTCTTGTTCCTGATGGCAGTGCAAAGGCTCTTTCCAGGTACACTGAAATGGTAGATGATATTATAAGGACACAGGCTGAAAAATTACAAGCAGCTAGTGAGCTTACTCGAGTTAGGCTTAAGGAAATGGACCTACCAGATTCTATTCTAGCTTTGGAAGGAAACTTTTCTCTACCAACGGAGCTCAAAGAAGAGGTGGAGGCTGTGCAGATCTGTGGGGGTCCTGCTGGTTTGGAATCTGAGTTGGAGCAACTCAAGGACCTAAGGAGGGTGAACCAAGAACTACTTGTCCAGACTGAGGAACTACTGCAGAAGGAAGCAAGAGAAGATGCTCAATTTAGAAGCCAATTTGGAACAAAGTGGACTAGACCTCAATCTAGTACTCTGACAAAGAACTTGCAGGACAGGTTAAATAGGTTTGCAGGTAATGTGAAGCAAGCTGCAGAGAGTGATGGTAGGATTGAGCGTTCGGTTAGAGAACATGCAGCACTCATGTCAATCCTGGACCACCGCCCGATTGAATCAGCACTTCCAAGTTTGGCAAGGCCAATAATGTCTTTGGATGCTAATGAAGATGCTATTGTGGGGTCCCTCAAGCAGAGTTTGAGGCAACTAGAAACTCTGGGAGCTCAAAGGGCTGGTCTTGAAGACATGCTTAAAGATATGAAAAGAAAGGATGATATATTACCCAAATTGATGACATCAACTGGCTCACATGAGGATCTTTTCAAGAAAGAAATAACAAAATATGACCATATTTGTGAAGACATAGCTCGAAATATTGAGGCTCAAGAGCAGTTGTTGCTGCAGATCCAGGCCCAAAATGACGAGTTCTCTGCAATCTTTAATCTTGAAGATTACCGAGCTTCACGCGAAAAATGCTACAAGCAGATTGAAGGTGCCATGGCAAAGTTTCGAGAAATTAAAGATAACATCAATGAAGGGTTGAAATTCTATGTTACTCTTCAGGATGCAATCACAAACGTAAAGCAGCAGTGCAGTGACTTTGTAATGACCAGAAACATCCAGTGCAGAGAAATGATTGAAGACGTTCAGAGACAACTGGCTGGTCTCAGTTTCCAGGATAACAAAAACACAGGTACTTTCAACAATAACTACCCTCCGGTGGGGCATCAAACTCAAAGATCCACTCCACAAATGGATTCTCGTCCCCAAACAACTTATTATCAGCAGCCACCGGAGCAACCACCAGTGGCTGGATATGCTCACCATCCTCCCTCATATGGTTCTGCACACCAGCCTCCACCTCCATACCACGTTCCACCCTCATCCCACATTCCGCCAGCGGCAGCTGCTCCATACCCTCCTTCTCAGCCCCATCAGCAGCCACCAGTAAGCCACGGATATGGCCAACCGACATATCCTGGATGGCACGGTCCTTATTATAATGCACCTGGACAACAACCTTCATCTGTTCCTCGGCCTCCTTACAACATCCGTGGTCAATATCATCCCCATCAAAGTGGCTACTATCGACAGCAATAGACTTTGACCTCTAGGCTTAATATTTTTTGTGATGATTTTGCTGTAACAAATATTCAAATCTCAAAGCCTTGGCGTTTCTGTTGGTTTGCATTATTATCGGATGGTGAATTTTGCATAGCGCTTATGCAAGAATTGTCCTGTGTATAGTCTGTTGATACGAGTAGTTTGAGAGGACAATTGTTTGTTTACTG 2909 0.4572 MAASPSSSSAAATTNIMLAIFEKKTSQIDLYRPLRNYVAFHYSEREAQNLEDDLQTLKQLRSDLERHSDPSLPSRRDLLQSYYKALCLVETRFPISPDQDHVNTLSFVWFDAFKPKQKATQQSIHLEKAAVLFNLGAVYSQIGLSYDRNTVDGRRQASRAFITAAGSFAYLKDNASMKVSIGGSTTVDLSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALASLNVAPLSQHFDKAWIAHVQLKAALFYGEACYRYGLELHEKEEIAEEIARLRSGVTALTEAKKNSKGAAAQILDAISKLEANINRNLERAGKENDRVYFMRVPNPNTLPPLPAFSMVKSMAMNEVLDASKEKMFASLVPDGSAKALSRYTEMVDDIIRTQAEKLQAASELTRVRLKEMDLPDSILALEGNFSLPTELKEEVEAVQICGGPAGLESELEQLKDLRRVNQELLVQTEELLQKEAREDAQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNVKQAAESDGRIERSVREHAALMSILDHRPIESALPSLARPIMSLDANEDAIVGSLKQSLRQLETLGAQRAGLEDMLKDMKRKDDILPKLMTSTGSHEDLFKKEITKYDHICEDIARNIEAQEQLLLQIQAQNDEFSAIFNLEDYRASREKCYKQIEGAMAKFREIKDNINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCREMIEDVQRQLAGLSFQDNKNTGTFNNNYPPVGHQTQRSTPQMDSRPQTTYYQQPPEQPPVAGYAHHPPSYGSAHQPPPPYHVPPSSHIPPAAAAPYPPSQPHQQPPVSHGYGQPTYPGWHGPYYNAPGQQPSSVPRPPYNIRGQYHPHQSGYYRQQ 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01276 875 Coils Coil 628 648 - -
Bach10g01276 875 CDD BRO1_Alix_like_1 17 372 - -
Bach10g01276 875 CDD V_Alix_like_1 378 714 - -
Bach10g01276 875 Gene3D alix/aip1 like domains 11 377 IPR038499 -
Bach10g01276 875 Coils Coil 40 67 - -
Bach10g01276 875 MobiDBLite consensus disorder prediction 735 875 - -
Bach10g01276 875 Pfam ALIX V-shaped domain binding to HIV 431 716 IPR025304 GO:0005515
Bach10g01276 875 ProSiteProfiles BRO1 domain profile. 15 410 IPR004328 -
Bach10g01276 875 PANTHER PCD6 INTERACTING PROTEIN-RELATED 16 865 - -
Bach10g01276 875 MobiDBLite consensus disorder prediction 735 774 - -
Bach10g01276 875 Pfam BRO1-like domain 17 395 IPR004328 -
Bach10g01276 875 Coils Coil 452 479 - -
Bach10g01276 875 Gene3D alix/aip1 in complex with the ypdl late domain 378 656 - -
Bach10g01276 875 MobiDBLite consensus disorder prediction 790 823 - -
Bach10g01276 875 Gene3D alix/aip1 like domains 424 705 - -
Bach10g01276 875 Coils Coil 579 599 - -
Bach10g01276 875 SMART BRO1_2 16 400 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01276 Bach-Chr10 10089579 10095815 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01276 10 10089579 10095815 Bach10g01276 10 10089579 10095815 ECH