Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01268 ATGTCACTTGCCACTGTTTGTTGTGTCCCGTCACCTCAGACAAACAACTGTCGAAACGCCGCCGCCGTACCTTACATGCACTCTACTTCTTCTCCTTCTTTCCAATTCTCTTCCAGCAAAACCCTAAAATACTCAACTTCTCCTCCATTTCTCGTAATGAAGGACCGGCCTCCGCCGTCCTCGTATGGTGCCATTTACGTCCCTCCCCACCACCGTATTCGCTCCGTCGTCACCTCCGCCAATGGCATCAACTCTCATGCTCCGGTTGATTCCAAGCTTAGCGAAAGCCAAGCTGAGATTTTAAAATCTAAAGCTACTACTCTGCCTCACTCGCAGACCCAGCTGCAGTGGGAACAAATTCACAAGGGGAATTCGCGCTGTGTTTCTGCTCATGATGATGGCATTTCCGAGGATGGGGCGGCTCGTGAGGTTGATACATCGTCTCTGACGAGTACTTACCCCAGTGATAATGCTGATGAATGGAAGCGGAGATTGACCTTATTTTTAAATGACAAGAGTAAGCGAGAGTTGATTTCAAGGGAGAAAAAGGATAGACGTGATTTTGAGAAAATAGCAGCTTTGGCAAGCCGAATGGGATTATATAGCCATATGTATGCAAAAGCTGTTGTCTTCAGTAAGGTCCCACTGCCGAACTATAGATATGATCTGGATGATCGACGGCCACAGAGGGAGGTGTGCATGCCTTTTACCTTGTTAAGAAGAGTTGATGCATATCTTGGAGAATACCTTTCCCAAAAGTCTAAGGTGAAGGGAAGCTTTCCAGATTTGTCCTTAGCAAGAACAAGTAGTAACAGTAGTATTGGTACAGATGAAGGGCTTTTTGAGCAACAACCTGAGCCACTACCTTCCAGTAAGGCAGTTGTGGAGAAAATTCTCCAGCGGAGAAGCTTACAAATGCTTGATCAGCAACAAACTTGGCAGGAATCTCCTGAGGGAAGAAGAATGCTGGAATTTCGTAGAAGTCTCCCTGCTTATAAAGAGAAGGAGGCCATATTGACTGTCATATCAAAGAATCAGGTTGTTATCATCTCAGGCGAAACAGGTTGTGGTAAGACCACACAGATTCCACAGTTCATTTTAGAATCTGAGACAGAATCTCTTCATGGAGCTGTTTGTAATATTATATGTACACAGCCAAGACGCATTTCAGCCATGTCTGTTTCTGAACGAGTTGCCCTTGAGAGAGGGGAGAAATTGGGTGAATCTGTTGGGTATAAAGTTCGATTTGAGGGTATGAAAGGGAAAGATACACATCTTCTCTTTTGCACCACTGGCATCTTATTGAGAAGATTGCTAGCTGATAGAAACTTAAAAGGTGTAACTCATGTGATTGTGGATGAAATTCATGAGCGTGGAATGAATGAAGATTTTCTGCTTATTGTGCTTAAAGATCTTCTCCCTCGCCGACCAGAGTTAAGGCTGATTTTGATGAGTGCTACCCTAGATGCAGAGCTCTTCTCCTCATACTTTGATGGTGCTCCAATCTTAAAAATTCCGGGCTTCACATACCCCGTGAAAAGTCATTTTTTGGAGGACGTTCTGCAAATGACAGGCTACAGATTGACTCCTTACAATCAAATTGATGACTATGGTCAAGAAAGGATGTGGAAAATGAGCAAACAAGCTCCAAGAAAGAGGAAAAGCCAAATTGCTTCTGCTGTAGAGGACACGCTAAGAGCTGTTGATTTCAAGAATTACAGCCCAGAGACATGGGAATCTTTGTTGTGTTGGAATCCTGACTGTATTGGTTTTAATCTCATAGAGTATATCTTATGCAATATATGTGAGAATGAAAGACCTGGTGCTGTTTTGGTTTTTATGACTGGATGGGATGATATAAGCTCGCTGAAAGATAAGCTCCTAGCACATCCAATCTTGGGAGATCCAAACCGAGTTTTGTTGCTTACATGCCATGGCTCAATGGCTAGTTCAGAGCAGAGGTTAATATTTGAAGAGCCTGAAGATGGAGTAAGGAAAATAGTGCTGGCAACCAATATTGCTGAGACGAGTATTACCATAAATGATGTTGTTTTTGTTCTTGAGTGTGGGAAGGCCAAGGAAACATCATATGATGCGCTGAACAATACACCCTGTTTGCTTCCATCCTGGATCTCCAAGGTTTCTGCTCTACAAAGAAGAGGAAGAGCTGGTCGTGTTCAACCCGGAGAATGTTACCATCTCTATCCTAGATGTGTATATGATGCTTTTGCAGAGTATCAATTGGCAGAAATTTTGAGGACACCTTGCAATCTCTGTGCCTGCAAATCAAAAGTACAAAATGCCATTGAATATTTGAAAATAATTGGGGCTTTGGATGAGAATGAAGATCTGACCATTCTAGGGCACTATTTGACAATGCTTCCAATGGAACCCAAACTCGGCAAGATGCTCATATTAGGTGCTATATTCAATTGCCTGGACCCCATATTAACTATTGCTGCTGGCCTCAGTGTGAGAGATCCTTTTCTAACACCTCTGGATAAAAAAGATCTTGCAGAGGCCGCAAAATCTCAATTTGCCCACGATTACAGTGACCACTTTGCCCTTGTTAGGGCTTACGAGGGATGGAAAGATGCTGAAATGGACCTGGTTGGATATGAGTACTGCTGGAAAAATTTCCTTTCAGAACAATCAATGAAAGCAATTGATGCTCTTCGTTGGGAATTCTTATCCATGCTCAAGGATATTGGATTAGTCGATAGCAAAGCAACTACCTGCAATGCATGGAGCCATGATGTGCATCTTATTCGAGCTGTTATTTGCTGCGGCCTGTATCCTGGAATTTGCTCTGTTGTGCACAATGAGAAGTCATTTTCTCTGAAGACGATGGAGGATGGCCAAGTTCTCCTATATTCGAACTCGGTGAATGCTCGGGAAACTGAAATTCCATATCCATGGTTAGTTTTTAACAAGAAGATAAAAGTGAACTCTGTTTTTCTCCGTGATTCAATGACTGTGCCTGATTCAGTGTTGCTTCTTTTTGGTGGAGCCATATCAAAAGGAGATGCTGACGGTCACCTAAAAATGTTAAGAGGATATCTGGAGTTTTTCATGGAACCTGCAGTTGCTGACATGTATTTAATTATAAAGAGAGAACTTGATAACTTGATTCAGACTAAACTACATCATCCAAGGATGAGCATACAAATACACCATGAGCTCTTATCTGCTGTTCGCTTGCTGATTTCGGAAGAAAAATCTGAAGGCAGATTTGTATTTGGTCGCCAGGTCCTTAAACCATCAGAGCCATTGGTAGTGGCCTCACAGCCAGCATTGGTTTCAAGGACTGAGAGTGGACCTGGGGGTGATAATCCTAAAAGTCAGCTCCAAACATTGCTTACAAGGGCAGGATATGCTGCTCCCAGCTATAAAACTAAGCAATTGAACAACAACCAGTTTCAAGCCACCGTTGAGTTTAATGGAATGCAAATAATGGGTCAACCTTGTAACAACAAGAAAAATGCAGAAAAAGATGCTGCGGGTGAGGCACTGCAGTGGCTGATCGGCAGAAGGCAGACAGGCCATGAGTATATCAATCGTATGTCTATGTTGCTAAAGAAAAGTAAAAAGGATCATAACTAA 3603 0.428 MSLATVCCVPSPQTNNCRNAAAVPYMHSTSSPSFQFSSSKTLKYSTSPPFLVMKDRPPPSSYGAIYVPPHHRIRSVVTSANGINSHAPVDSKLSESQAEILKSKATTLPHSQTQLQWEQIHKGNSRCVSAHDDGISEDGAAREVDTSSLTSTYPSDNADEWKRRLTLFLNDKSKRELISREKKDRRDFEKIAALASRMGLYSHMYAKAVVFSKVPLPNYRYDLDDRRPQREVCMPFTLLRRVDAYLGEYLSQKSKVKGSFPDLSLARTSSNSSIGTDEGLFEQQPEPLPSSKAVVEKILQRRSLQMLDQQQTWQESPEGRRMLEFRRSLPAYKEKEAILTVISKNQVVIISGETGCGKTTQIPQFILESETESLHGAVCNIICTQPRRISAMSVSERVALERGEKLGESVGYKVRFEGMKGKDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLDAELFSSYFDGAPILKIPGFTYPVKSHFLEDVLQMTGYRLTPYNQIDDYGQERMWKMSKQAPRKRKSQIASAVEDTLRAVDFKNYSPETWESLLCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISSLKDKLLAHPILGDPNRVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLECGKAKETSYDALNNTPCLLPSWISKVSALQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLAEILRTPCNLCACKSKVQNAIEYLKIIGALDENEDLTILGHYLTMLPMEPKLGKMLILGAIFNCLDPILTIAAGLSVRDPFLTPLDKKDLAEAAKSQFAHDYSDHFALVRAYEGWKDAEMDLVGYEYCWKNFLSEQSMKAIDALRWEFLSMLKDIGLVDSKATTCNAWSHDVHLIRAVICCGLYPGICSVVHNEKSFSLKTMEDGQVLLYSNSVNARETEIPYPWLVFNKKIKVNSVFLRDSMTVPDSVLLLFGGAISKGDADGHLKMLRGYLEFFMEPAVADMYLIIKRELDNLIQTKLHHPRMSIQIHHELLSAVRLLISEEKSEGRFVFGRQVLKPSEPLVVASQPALVSRTESGPGGDNPKSQLQTLLTRAGYAAPSYKTKQLNNNQFQATVEFNGMQIMGQPCNNKKNAEKDAAGEALQWLIGRRQTGHEYINRMSMLLKKSKKDHN 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01268 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 871 IPR027417 -
Bach10g01268 1200 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1111 1176 IPR014720 -
Bach10g01268 1200 Gene3D - 1094 1179 - -
Bach10g01268 1200 SMART ha2_5 767 857 IPR007502 GO:0004386
Bach10g01268 1200 PANTHER ATP-DEPENDENT RNA HELICASE 278 1026 - -
Bach10g01268 1200 SMART ultradead3 327 520 IPR014001 -
Bach10g01268 1200 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 593 769 IPR001650 -
Bach10g01268 1200 Pfam Helicase associated domain (HA2) 768 848 IPR007502 GO:0004386
Bach10g01268 1200 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 923 1005 IPR011709 -
Bach10g01268 1200 CDD DEXHc_RHA-like 345 505 - -
Bach10g01268 1200 Gene3D - 761 851 - -
Bach10g01268 1200 SUPERFAMILY dsRNA-binding domain-like 1106 1174 - -
Bach10g01268 1200 FunFam DExH-box ATP-dependent RNA helicase DExH3 282 507 - -
Bach10g01268 1200 FunFam DExH-box ATP-dependent RNA helicase DExH3 589 745 - -
Bach10g01268 1200 Pfam Double-stranded RNA binding motif 1112 1174 IPR014720 -
Bach10g01268 1200 FunFam Putative ATP-dependent RNA helicase DHX36 745 851 - -
Bach10g01268 1200 Gene3D - 592 746 IPR027417 -
Bach10g01268 1200 FunFam DExH-box ATP-dependent RNA helicase DExH3 1091 1179 - -
Bach10g01268 1200 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 339 506 IPR014001 -
Bach10g01268 1200 Pfam Helicase conserved C-terminal domain 595 726 IPR001650 -
Bach10g01268 1200 Gene3D - 288 507 IPR027417 -
Bach10g01268 1200 CDD SF2_C_RHA 573 735 - -
Bach10g01268 1200 SMART helicmild6 621 727 IPR001650 -
Bach10g01268 1200 Pfam DEAD/DEAH box helicase 337 489 IPR011545 GO:0003676|GO:0005524
Bach10g01268 1200 SMART DRBM_3 1112 1175 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01268 Bach-Chr10 9995129 10005272 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01268 10 9995129 10005272 Bach10g01268 10 9995129 10005272 ECH