Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01260 ATGGAATCGGGTCGAGAGAAAATGGCAATCCCGTCTCATCGTGGGGTCACAAATGGTGCTGCTGCTTTTGATTCAGGACTTGCCCGTCTTCTCGAACTCGGTTACAAGCAAGAGCTCAAGCGTGATTTATCGGTCATTTCCAATTTTGCTTTCTCTTTTTCTATCATCTCAGTGCTCACTGGTATAACCACCCTTTACAATTATGGGTTAAGTTATGGTGGTCCTGTATCTTTTGTCTATGGGTGGTTTATGGTTTCTGCTTTTACTACGACTATTGGCTTGTCAATGGCTGAAATTTGTTCATCTTACCCAACTTCTGGTGGCCTTTACTATTGGAGTGCCAAGCTTGCTGGCCCACGGTGGGCTCCCTTTGCTTCCTGGATTACTGGTTGGTTCAATATTGTTGGACAGTGGGCAGGAACAGCAAGTGTAGATTATTCACTTGCACAGCTAATACAGGTTATCATTCTCCTTAGCACTGGTGGAAAAAACGGAGGTGGATATGAGGCTTCTAAGTATGTAGTTATTGGTTTTCATGGGGGACTTCTGCTCCTGCATGCTATAATAAATAGCCTACCTATCTCATTGTTATCATTCTTTGGACAGTTAGCTGCTATCTGGAATCTTGTAGGTCTTTTTATGCTTATGATTCTCATTCCATCTGTTGCAACGGAAAGGGCTAGTGTCAAGTTTGTTTTCACTCGTTTTAATACTGATAATGGGGAGGGAATCAGCAGCAGACCTTACATATTTGTCCTGGGACTTCTAATGAGTCAATATACCCTTCTTGGGTATGATATTTCTGCTCATATGACAGAAGAAACCAAGAATGCTGATAGAAATGGCCCAAAGGGAATTATCAGTGCGATTGGGATTTCAATTATTGTAGGATGGGGTTACATACTTGGCATTACCTTTGCAATTCCTGATATCTCTTACCTGCTGAATGAAAATAACGATGCTGGAGGGTATGCCATTGCTGAAATATTTTATCTAGCATTCAAGGAAAGGTATGGTAGTGGAGTTGGGGGCATTATTTGCTTGGGAGTGGTTGCTGTTGCCATATTTTTCTGTGGTATGAGTGCAGTTACTAGCAACTCTAGGATGACTTATGCTTTCTCTAGAGATGGAGCAATGCCATTATCATCAATATGGCATAAAGTTAACAGACAGGAGGTCCCTATAAATGCAGTTTGGTTATCTGCTTTTATTTCATTTTGCATGGCACTAACGTCTCTTGGAAGCATGGTGGCATTTCAGGCAATGGTATCCATAGCAACAATTGGCCTCCAAATCGCTTATGCCCTTCCCATCTTCTTCAGATTGACTTTGGCACACAAGTCATTCGTCCCAGGGCCATTCAACTTGGGGCGCTATGGAGTCTTTGTTGGCTGGGTTGCAGTTGTTTGGGTGTTGACCACAGCCATTCTCTTCTCATTGCCTGTTGCCTACCCAATAACCATTCAAACTCTCAACTATACCCCTGTTGCTGTTGGAATGCTCACTGGTATAACCACCCTTTACAATTATGGGTTAAGATATGGCGGTCCTGTATCTTTTGTTTATGGGTGGTTTATAGTTTCTGCTTTTACTACGACTATTGGCTTGTCAATGGCTAAAATTTGTTCATCTTACCCAACTGCTGGTGGCCTTTACTATTGGAGTGCCAAGCTTGCTGGCCCACGGTGGGCTCCCTTTGCTTCCTGGATTACTGGTTGGTTCAATATTGTTGGACAGTGGGCAGGAACAGCAAGTGTAGATTATTCACTTGCACAGCTAATACAGGTTATCATTCTCCTTAGCACTGGTGGAAAAAACGGAGGTGGATATGAGGCTTCTAAGGCTAGTGTCAAGTTTGTTTTCACTCGTTTTAATACTGATAATGGGGAGGGAATCAGCAGCAGACCTTACATATTTGTCCTGGGACTTCTAATGAGTCAATATACCCTTCTTGGGTATGATATTTCTGCTCATATGACAGAAGAAACCAAGAATGCTGATAGAAATGGCCCAAAGGGAATTATCAGTGCGATTGGGATTTCAATTATTGTAGGATGGGGTTACATACTTGGCATTACCTTTGCAATTCCTGATATCTCTTACCTGCTGAATGAAAATAACGATGCTGGAGGGTATGCCATTGCTGAAATATTTTATCTAGCATTCAAGGAAAGGTATGGTAGTGGAGTTGGGGGCATTATTTGCTTGGGAGTGGTTGCTGTTGCCATATTTTTCTGTGGTATGAGTGCAGTTACTAGCAACTCTAGGATGACTTATGCTTTCTCTAGAGATGGAGCAATGCCATTATCATCAATACGGCATAAAGTTAACAGACAGGAGGTCCCCATAAATGCAGTTTGGTTATCTGCTTTTATTTCATTTTGCATGGCACTAACGTCTCTTGGAAGCATGGTGGCATTTCAGGCAATGGTATCCATAGCAACAATTGGCCTCCAAATCGCTTATGCCCTTCCCATCTTCTTCAGATTGACTTTGGCACACAAGTCATTCGTCCCAGGGCCATTCACCTTGGGGCGCTATGGGGTCTTTGTTGGCTGGGTTGCAGTTGTTTGGGTGTTGACCACAGCCATTCTCTTCTCATTGCCTGTTGCCTCCCAATAA 2622 0.4291 MESGREKMAIPSHRGVTNGAAAFDSGLARLLELGYKQELKRDLSVISNFAFSFSIISVLTGITTLYNYGLSYGGPVSFVYGWFMVSAFTTTIGLSMAEICSSYPTSGGLYYWSAKLAGPRWAPFASWITGWFNIVGQWAGTASVDYSLAQLIQVIILLSTGGKNGGGYEASKYVVIGFHGGLLLLHAIINSLPISLLSFFGQLAAIWNLVGLFMLMILIPSVATERASVKFVFTRFNTDNGEGISSRPYIFVLGLLMSQYTLLGYDISAHMTEETKNADRNGPKGIISAIGISIIVGWGYILGITFAIPDISYLLNENNDAGGYAIAEIFYLAFKERYGSGVGGIICLGVVAVAIFFCGMSAVTSNSRMTYAFSRDGAMPLSSIWHKVNRQEVPINAVWLSAFISFCMALTSLGSMVAFQAMVSIATIGLQIAYALPIFFRLTLAHKSFVPGPFNLGRYGVFVGWVAVVWVLTTAILFSLPVAYPITIQTLNYTPVAVGMLTGITTLYNYGLRYGGPVSFVYGWFIVSAFTTTIGLSMAKICSSYPTAGGLYYWSAKLAGPRWAPFASWITGWFNIVGQWAGTASVDYSLAQLIQVIILLSTGGKNGGGYEASKASVKFVFTRFNTDNGEGISSRPYIFVLGLLMSQYTLLGYDISAHMTEETKNADRNGPKGIISAIGISIIVGWGYILGITFAIPDISYLLNENNDAGGYAIAEIFYLAFKERYGSGVGGIICLGVVAVAIFFCGMSAVTSNSRMTYAFSRDGAMPLSSIRHKVNRQEVPINAVWLSAFISFCMALTSLGSMVAFQAMVSIATIGLQIAYALPIFFRLTLAHKSFVPGPFTLGRYGVFVGWVAVVWVLTTAILFSLPVASQ 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01260 873 NCBIfam amino acid permease 30 501 IPR004756 GO:0006865|GO:0016020
Bach10g01260 873 ProSitePatterns Amino acid permeases signature. 73 104 IPR004840 GO:0006865|GO:0016020|GO:0055085
Bach10g01260 873 PANTHER AMINO-ACID PERMEASE BAT1 20 501 - -
Bach10g01260 873 FunFam Amino-acid permease BAT1 37 501 - -
Bach10g01260 873 Pfam Amino acid permease 613 869 IPR002293 GO:0016020|GO:0022857|GO:0055085
Bach10g01260 873 Pfam Amino acid permease 43 500 IPR002293 GO:0016020|GO:0022857|GO:0055085
Bach10g01260 873 Gene3D Amino acid/polyamine transporter I 596 872 - -
Bach10g01260 873 Gene3D Amino acid/polyamine transporter I 37 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01260 Bach-Chr10 9898090 9907051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01260 534 871 Organic Solute Cotransporters AT2G01170 65.816 5.45e-159 470
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01260 10 9898090 9907051 Bach10g01260 10 9898090 9907051 ECH