Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01220 ATGACCTCTGCCAAGAACGTGACAAACGCCGTCGGTGGCAAAACCGCAAGAGCCTGTGATAGCTGTATAAAGAAGCGGGCACGATGGTATTGTGCTGCCGACGACGCTTTTCTCTGTCAAACTTGTGACTCTTCCGTTCACTCGGCGAATCCCTTGGCTCGTAGGCATGAAAGAGTTGGCTTGAAAATGGCGTCGTATGAGTCGTCGGATCGTGCCGCTGCCGGGGAAGTTGCCAATTCTGCTCCGTCGTGGCACCGTGGGTTCACCAAGAAGGCTCGAACACCACGACATGGGAAACACTACTCAACCAATCATCAAACATCTAATAAAGTAAAAGATGAGCTTGCAGGGAGGAATCCATTTCGTCTGGTGCCGGAAGTGGGATCCGACGAAGCGAATTCGATTGATGAAAATGAAGCACAGCTGCTTTATCGGGTACCTATTTTCGATCCCTTCTTGGCCGAGCTGTGTACTCCTCCATCGTCGGTGACTTCAACTGAAGCAGCAACAGCAATGGCGAGTCCTGACGAGGAGGAGAACAAGGCTAACAAGAGCCTCGAAAACAAAGCTTTTTCGAGTAATAACAGTACAGGGGTTGAAAACTTACATGAGTTTCTTCCATCTGATAAGGAAGTTGCTGAATTTGCAGCAGATGTTGAGAGCTTATTGGGTAGGGGGATAGAAAATGAGTGTATTGGCATGGAAGAGTTGGGTCTGATTGATTCCAAACAAGATGTTTTCAGGGAGTATTCTATGAGTACTGGGAAGGCGAAGATAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGTATGGAAATGGCAGCTGCTGCTTCTGCAGCTTGCAAGCTAGAGATGGATCAGATGGAGATGGGGAAAGAACCATTTGAATTTAATTTCGATTCTGACTCTGCTGAAGCACTGGAAGACGTGGAGGAGAAGCCTGGTTTCCATATGAACAAAGATTTCAAGAATGGTGGGGAATTCAATGGGAATAACAAAGTGAAGAAGATATTGTTGAGGCTTGATTATGAGGCAGTAATCACTGCCTGGGCAAGCCAACGGTGTCCATGGACTAATGGAAATAAACCAGATTTTGACCCTGATGAGTGCTGGCCTGATTGCATGGGTACTCTTGGAATGGAGCTTCACCATACCTATGGTGAGTTGGGTGGCTTTGGGGTTCACCCGGCAATAGCAGACGAGGGAAGAGAGGCGAGGGTGTTAAGGTACAGAGAGAAGCGTCGGACGAGGTTGTTTTCTAAGAAAATAAGGTACGAAGTCCGGAAATTGAATGCAGAGAAGAGACCGAGAATGAAAGGGAGGTTTGTGAAGAGGACTTCTTTTGCAGCACTACCTAGTTTCCCTTTGCTAAGCAAATGA 1377 0.4713 MTSAKNVTNAVGGKTARACDSCIKKRARWYCAADDAFLCQTCDSSVHSANPLARRHERVGLKMASYESSDRAAAGEVANSAPSWHRGFTKKARTPRHGKHYSTNHQTSNKVKDELAGRNPFRLVPEVGSDEANSIDENEAQLLYRVPIFDPFLAELCTPPSSVTSTEAATAMASPDEEENKANKSLENKAFSSNNSTGVENLHEFLPSDKEVAEFAADVESLLGRGIENECIGMEELGLIDSKQDVFREYSMSTGKAKIEEEEEEEEEGMEMAAAASAACKLEMDQMEMGKEPFEFNFDSDSAEALEDVEEKPGFHMNKDFKNGGEFNGNNKVKKILLRLDYEAVITAWASQRCPWTNGNKPDFDPDECWPDCMGTLGMELHHTYGELGGFGVHPAIADEGREARVLRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSFAALPSFPLLSK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01220 458 MobiDBLite consensus disorder prediction 164 183 - -
Bach10g01220 458 Pfam CCT motif 402 444 IPR010402 GO:0005515
Bach10g01220 458 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Bach10g01220 458 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 10 446 - -
Bach10g01220 458 Pfam B-box zinc finger 16 59 IPR000315 GO:0008270
Bach10g01220 458 CDD Bbox1_BBX-like 18 61 - -
Bach10g01220 458 ProSiteProfiles CCT domain profile. 402 444 IPR010402 GO:0005515
Bach10g01220 458 SMART bboxneu5 14 61 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01220 Bach-Chr10 9347675 9349338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01220 5 449 C2C2-CO-like Transcription Factor Family AT1G68520 42.232 1.65e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach10g01220 zf-B_box 1.5e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01220 10 9347675 9349338 Bach10g01220 10 9347675 9349338 ECH