Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01216 ATGAATAATACCAACAAAAAGCTCAAACAAAAGCCTAATCCCTTTCGAGACTCTCGAATGGTGAGAAAGCTCCGGATCATCTGCTATGACCCGGATGCTACTGATTCATCTTCAAGCGAAGACGAAGCTGAGAAGCCCAGAAAACTCAAACGCATCGTACGAGAAGTGAGTCTTCCTCCTCCTTTTGCTAAGAAACCTGCTTCTGAAGCTGAGACTTCTGCTCAAGATAGCAGCAATGGAGACCTTGTCTCTTGTGCAAATGGTCAATCCCCCAGTAGAAAGAGGGCTTTGACCAGAACCCCATCAACGAGAAGACCCGGTGCTTCCAAGTATAGAGGTGTTCGACAAAGAAAATGGGGGAAATGGGCTGCAGAGATTCGTGACCCTTTCAAGGGTGGACGTATTTGGTTGGGAACTTACAACACTGCAGAGGAAGCTTCCGAAGCTTATGAGAATAAAAGGAAGGAATTCGAACAAAATATGGCTAAGCTTGAATCTGAGAAGAGCAACAATATTTCTTCTTCTGCTGCCATTGCTCATTCTAGAAAGAGCAACAATGTCACTTGCTTCCTTGCCGCATCTGAATCATTTAAGTCTGCTGCTGCCTCTGAGGACTCAGTGAGTGGGTTGTCTCACACTTCACCATCTTCAGTTCTGGAATTAGATACCTTAGCATCCAAAGAAAACGTCAATGCTAAGGTTTCAAGCAAAGCAGAACCGGTTGAACTGGTTCTGGAGACTAATGATTTACAGAATCAATTTGCAGATCTGCAAATTCCCGATTTGAGCTTCCTGGGCATGCCACCACCGCCATCCGGGCCAGCTGAGACAGACATCAATCTTGCTCTAGACTTAGATTTGTTTGTGTTTGATGAATTTTCACAGGGTTTGGGTGATCTTGGTGGCCTTGACGACTTCCAAATCAGTGGTTTTGATGAGAATGAGGCAAGCAAGCTACCTGATTTCGATTTTGATCTTTGTGCTGATGAGTTTGCTGGTTGGACTGAGGAGCCCCTCAATATACCGTGCGCATAA 1035 0.4512 MNNTNKKLKQKPNPFRDSRMVRKLRIICYDPDATDSSSSEDEAEKPRKLKRIVREVSLPPPFAKKPASEAETSAQDSSNGDLVSCANGQSPSRKRALTRTPSTRRPGASKYRGVRQRKWGKWAAEIRDPFKGGRIWLGTYNTAEEASEAYENKRKEFEQNMAKLESEKSNNISSSAAIAHSRKSNNVTCFLAASESFKSAAASEDSVSGLSHTSPSSVLELDTLASKENVNAKVSSKAEPVELVLETNDLQNQFADLQIPDLSFLGMPPPPSGPAETDINLALDLDLFVFDEFSQGLGDLGGLDDFQISGFDENEASKLPDFDFDLCADEFAGWTEEPLNIPCA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01216 344 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Bach10g01216 344 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Bach10g01216 344 MobiDBLite consensus disorder prediction 1 20 - -
Bach10g01216 344 Coils Coil 140 167 - -
Bach10g01216 344 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
Bach10g01216 344 MobiDBLite consensus disorder prediction 38 54 - -
Bach10g01216 344 Gene3D AP2/ERF domain 109 167 IPR036955 GO:0003700|GO:0006355
Bach10g01216 344 CDD AP2 109 150 IPR001471 GO:0003700|GO:0006355
Bach10g01216 344 SUPERFAMILY DNA-binding domain 109 162 IPR016177 GO:0003677
Bach10g01216 344 Pfam AP2 domain 109 159 IPR001471 GO:0003700|GO:0006355
Bach10g01216 344 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
Bach10g01216 344 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 229 - -
Bach10g01216 344 MobiDBLite consensus disorder prediction 70 105 - -
Bach10g01216 344 MobiDBLite consensus disorder prediction 30 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01216 Bach-Chr10 9296836 9297870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01216 3 343 AP2-EREBP Transcription Factor Family AT1G68550 37.216 5.12e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach10g01216 AP2 1.6e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01216 10 9296836 9297870 Bach10g01216 10 9296836 9297870 ECH