LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach10g01214	ATGGTTTCTCTCAACCCATTATTCCCCTCTATTTGTTTCTCTTCGATTATACTAGTTTTGCTTCTATGTGTAGCTGGAGCAAGCTCTTCGTCTTCTTCTGCTCCCAACGCCACCAAAATTGGCCTAGGTTACCGTCTTATCTCCATTGAAGAGACCTCTGATGGTGGCTTTGTTGGTTACCTCCAAGTTAAGCAGAAGAACAATATCTATGGCCCTGATATTCCCCTCTTGCAGCTCCATGTCAAGCACGAGACGGAGAATCGTTTGAGGGTGCACATAACTGACGCAAAGAAGCAAAGATGGGAGTTACCCTATGATCTTTTGCCAAGAGAGAAACCACCGGCTCCGAAGCAGACGATTGGAAGGTCCAGGAAAAGCCAACTATCAGGCACAGACTACCCCGGCTCTGAGCTAATTTTTATCTATAAAGAAGACCCTTTTGGTTTTGCAGTGAAAAGGAAGTCAAATGGGCAGACCCTTTTCAACTCTAGCTCTTCTGAATCAGACCCATTTGGGGAATTGGTCTTCAAGGACCAGTACCTTGAGATTTCTACCAAATTGCCCAAAGATGCATCCTTGTATGGCTTCGGAGAGAGCTCACGGCCTCATGGGATCAAATTGTATCCAAATGATCCGTACACTCTGTACACTACTGATATTGCTGCCCTTAATCTCAATATTGATCTTTATGGGTCTCATCCAATGTACATGGATCTCAGAAATGTAGGTGGTGAGCCTTCTGCTCATGCTGTTCTGCTTCTGAATAGCAATGGGATGGACGTTTTCTACAGAGGAACTTCTTTGACTTACAAGGTTATAGGAGGTGTATTTGATTTCTACTTCTTTGCTGGTCCTACCCCTCTAGATGTTGTTGATCAGTATACTTCCCTCATTGGCAGACCAGCTCCAATGCCTTACTGGTCTTTTGGATTCCATCAATGCAGATGGGGTTACCATAACCTATCTGTTGTGGAAGATGTTGTTGAGAACTACAAAAAGGCTCAAATCCCACTTGATGTGATCTGGACCGATGATGATCACATGGATGCGAAGAAGGATTTTACACTCAGTCGATTCAACTTCCCTCGTTCAAAGCTTTTGGATTTCCTAGACAGAATTCACAAGCTGGGTATGAAATATATTGTCATTGTTGATCCTGGCATTGGTGTTAACTCCAGCTATGGGGTATACCAAAGGGGCAAAGCTAACGATGTTTTCATTAAGTATGGAGGTGAACCCTACGTGGCTCAAGTGTGGCCTGGAGCAGTGAACTTCCCTGATTTTCTGAACCCAAAGACAGTTTCATGGTGGGGTGATGAGGTCCGCCGATTCCATGAACTTGTACCTGTTGATGGCTTATGGATTGACATGAATGAAGTTTCAAACTTTTGTACTGGGAAGTGTACAATTCCCAAAGACAGAGATTGCCCAGGAACTGGATTTGGATGGATATGTTGCTTAGATTGCAAGAATGTTACGATGACAAGATGGGATGATCCTCCATATAAGATCAATGCTTCAGGAATACAAGCTCCATTAGGCTACAAAACCATAGCCACTAGTGCAGTACATTACAATGGAGTTTTGGAGTATGATGCCCACAGTATCTATGGTTTCACTCATGCCGTTGCAACTCACAAGGCCCTTCAAGGGCTTCAGGGAAAACGACCATTTGTTTTGTCACGCTCCACTTTCGTTGGTTCGGGCAAATATGCTGCTCATTGGAGTGGTGACAATAAGGCCACATGGGATGACTTGAAGTTTTCTATATCTACCATGATTAATTTTGGCATATTTGGAGTGCCAATGGTTGGTTCTGACATATGTGGATTCTATCCAGACCCCACTGAAGAGCTATGCAGCCGGTGGATCGAAGTAGGCGCCTTCTACCCTTTCTCAAGGGATCATTCTAGTCATGATTCTCGTAGACAGGAGCTTTACCTATGGGATTCGGTAGCCAAGTCTGCTCGAAATGCTTTGGGTATTAGGTATAAGATTCTCCCTTATCTATACACCTTGAACTATGAAGCTCATAAAACTGGAGCTCCAATTGCCAGGCCTCTTTTCTTCTCATTTCCAAGTTACACAGAGTGTTATGGCCTCAGCACCCAATTCTTGCTTGGAAGCAGTCTTATGATTTCCCCTGTGCTGGATCAAGGGAAAACACAAGTGAAAGCATTGTTTCCTCCTGGTACTTGGTACAGTTTCTTGGATTTGACACACACCATTGTGTCAGAAGATGGAGTCTATGTTACCCTTGATGCACCTCTAAATGTGGTCAATGTGCATTTGTATCAGAACACCATTCTCCCCATTCAACAGGGTGGCTTGCTTTCCAAGGAAGCTAGAATGACACCCTTTACTCTGATAGTCACATTTCCATCAGGAGCATCTGAAGGACAAGCTAAAGGGAACCTTTACATTGATGATGATGAGCAACCAGAGATGCAGCTTGGAAATGGTTATTCTAGCTATGTTGATTTCTATGCAACTGTGAAACACGGAAGTGTGAAGGTTTGGTCACAAGTCCAAGAGGGCAAGTTTGCTTTGGATAAAGGTTTGGTTATTGAGAAGTTAACTGTGGTGGGATTAGAAGGAAGTGCTATAGCACCATCTGCAGTTGAACTTGATGGGAAACCCATTGCTGGAGTCTCACAGGTGGAGGTTAGTACTCGAGAACACTCATATCACATGGAGAACCAGGGAGATGGACAAAAGAAGTCGATGATGGTAGAAGTGAAGGGCTTGAACATCCCTGTGGGTAAAAATTTCGTCATGAACTGGAAAATGGGGGTATGA	2799	0.4391	MVSLNPLFPSICFSSIILVLLLCVAGASSSSSSAPNATKIGLGYRLISIEETSDGGFVGYLQVKQKNNIYGPDIPLLQLHVKHETENRLRVHITDAKKQRWELPYDLLPREKPPAPKQTIGRSRKSQLSGTDYPGSELIFIYKEDPFGFAVKRKSNGQTLFNSSSSESDPFGELVFKDQYLEISTKLPKDASLYGFGESSRPHGIKLYPNDPYTLYTTDIAALNLNIDLYGSHPMYMDLRNVGGEPSAHAVLLLNSNGMDVFYRGTSLTYKVIGGVFDFYFFAGPTPLDVVDQYTSLIGRPAPMPYWSFGFHQCRWGYHNLSVVEDVVENYKKAQIPLDVIWTDDDHMDAKKDFTLSRFNFPRSKLLDFLDRIHKLGMKYIVIVDPGIGVNSSYGVYQRGKANDVFIKYGGEPYVAQVWPGAVNFPDFLNPKTVSWWGDEVRRFHELVPVDGLWIDMNEVSNFCTGKCTIPKDRDCPGTGFGWICCLDCKNVTMTRWDDPPYKINASGIQAPLGYKTIATSAVHYNGVLEYDAHSIYGFTHAVATHKALQGLQGKRPFVLSRSTFVGSGKYAAHWSGDNKATWDDLKFSISTMINFGIFGVPMVGSDICGFYPDPTEELCSRWIEVGAFYPFSRDHSSHDSRRQELYLWDSVAKSARNALGIRYKILPYLYTLNYEAHKTGAPIARPLFFSFPSYTECYGLSTQFLLGSSLMISPVLDQGKTQVKALFPPGTWYSFLDLTHTIVSEDGVYVTLDAPLNVVNVHLYQNTILPIQQGGLLSKEARMTPFTLIVTFPSGASEGQAKGNLYIDDDEQPEMQLGNGYSSYVDFYATVKHGSVKVWSQVQEGKFALDKGLVIEKLTVVGLEGSAIAPSAVELDGKPIAGVSQVEVSTREHSYHMENQGDGQKKSMMVEVKGLNIPVGKNFVMNWKMGV	932

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach10g01214	932	FunFam	Alpha-glucosidase 1	37	300	-	-
	Bach10g01214	932	SUPERFAMILY	Glycosyl hydrolase domain	683	763	-	-
	Bach10g01214	932	SUPERFAMILY	(Trans)glycosidases	289	681	IPR017853	-
	Bach10g01214	932	Gene3D	-	768	932	IPR013780	-
	Bach10g01214	932	Pfam	N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase	56	189	IPR031727	-
	Bach10g01214	932	Gene3D	-	667	765	IPR013780	-
	Bach10g01214	932	FunFam	Alpha-glucosidase 1	666	766	-	-
	Bach10g01214	932	CDD	GH31_N	181	299	-	-
	Bach10g01214	932	ProSitePatterns	Glycosyl hydrolases family 31 active site.	452	459	IPR030458	-
	Bach10g01214	932	MobiDBLite	consensus disorder prediction	108	130	-	-
	Bach10g01214	932	Pfam	Glycosyl hydrolases family 31	280	770	IPR000322	GO:0004553\|GO:0005975
	Bach10g01214	932	FunFam	Maltase-glucoamylase, intestinal	301	665	-	-
	Bach10g01214	932	CDD	GH31_MGAM_SI_GAA	299	678	-	-
	Bach10g01214	932	Gene3D	glycosyl hydrolase (family 31)	38	300	-	-
	Bach10g01214	932	SUPERFAMILY	Galactose mutarotase-like	41	287	IPR011013	GO:0003824\|GO:0005975\|GO:0030246
	Bach10g01214	932	PANTHER	ALPHA-GLUCOSIDASE	59	889	-	-
	Bach10g01214	932	Gene3D	Glycosidases	301	665	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach10g01214	Bach-Chr10	9280181	9284394	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach10g01214	40	932	Glycoside Hydrolase	AT1G68560	72.819	0.0	1395

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach10g01214	10	9280181	9284394	Bach10g01214	10	9280181	9284394	ECH