Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01186 ATGAAAAAAGAGGAAGATCAGGGACAGTGTTCTTCACAAGCCATCAATAACATTCAAAGCTATCAAGAGCAGCTACTTCTGCAGCAACAGATGCAGCAACACAACGCTGATATCTATGGAGGAGGAAGAGGTTTGATGTTTCCTCCTGAAGTTTCTCCAATCTTGCAACCATGGTCTCTCCCTCCGGTTCATTCCTTCAACCCGACGGCGGCGGCTCACTTTGCAGCAGCCAACCCGGTCCGAGACCACGACCCTTTTCTTGTCCCTCCCCCTCCTTCATCATATGCAAGCCTATTTAATAGAAGGGTTAACGTTCCTTCTCTACAGTTTGCTTACGATGGTCATCCTTCAGACCATCTTCGGATCATATCAGATACCCTTGGACCGGTGGTTCAACCCGGTTCAGCACCCTTTGGTCTCCAGGCCGAGTTAGGAAAGATGACTACGCAAGAAATCATGGATGCTAAGGCTCTTGCAGCATCTAAGAGTCATAGTGAAGCTGAAAGGAGACGCAGAGAGAGAATCAATAACCATCTCGCCAAGCTTCGCAGCTTATTGCCAAGTACAACCAAAACGGACAAAGCTTCATTGTTAGCGGAAGTGATTCAAAATGTGAAGGAGCTGAAGCGTCAAACTTCATTGATAGCAGAAACAAGTTCAGTGCCTACAGAGGTTGATGAGCTAACAGTAGATACTGCTGATGAGGATGGCAAGTTTGTGATCAAAGCCTCACTTTGCTGTGAAGATAGGTCTGATCTCTTGCCTGACTTGATCAAAACCTTAAAAGACTTGGGATTGAGAACCCTTAAAGCCGAGATCACAACGCTTGGTGGGCGAGTAAAGAACGTGTTGTTCATCACTGGGGAAGAAGATTTAAGTAGCAGTGAAGATCAGCAGCAAAGCCAGCAAGAACAACAGCAATATTGTATAAGCTCAATACAAGAAGCACTTAAGGCTGTGATGGAGAAGAGTGGTGGGGATGAGTCTGCTTCTGGGAATGTTAAGAGGCAAAGGACTAATAATATCAATATCCTTGAACACAGGTCTTTATAA 1053 0.4539 MKKEEDQGQCSSQAINNIQSYQEQLLLQQQMQQHNADIYGGGRGLMFPPEVSPILQPWSLPPVHSFNPTAAAHFAAANPVRDHDPFLVPPPPSSYASLFNRRVNVPSLQFAYDGHPSDHLRIISDTLGPVVQPGSAPFGLQAELGKMTTQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQNVKELKRQTSLIAETSSVPTEVDELTVDTADEDGKFVIKASLCCEDRSDLLPDLIKTLKDLGLRTLKAEITTLGGRVKNVLFITGEEDLSSSEDQQQSQQEQQQYCISSIQEALKAVMEKSGGDESASGNVKRQRTNNINILEHRSL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01186 350 PANTHER TRANSCRIPTION FACTOR BHLH30 9 344 IPR045847 GO:0003700|GO:0006355
Bach10g01186 350 SMART finulus 165 214 IPR011598 GO:0046983
Bach10g01186 350 CDD bHLH_AtAIG1_like 154 231 - -
Bach10g01186 350 FunFam transcription factor bHLH30 154 217 - -
Bach10g01186 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 216 IPR036638 GO:0046983
Bach10g01186 350 Gene3D - 154 215 IPR036638 GO:0046983
Bach10g01186 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 208 IPR011598 GO:0046983
Bach10g01186 350 Pfam Helix-loop-helix DNA-binding domain 162 208 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01186 Bach-Chr10 8993570 8995680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01186 11 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 56.250 3.29e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach10g01186 HLH 4.6e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01186 10 8993570 8995680 Bach10g01186 10 8993570 8995680 ECH