Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00627 ATGGCAGAAAATAAAGACTTTGGTTCTTGTGAAAGTTCTGTATGTTCATCATCTTCAAGCTCCCCAATGGGTAGCAAGTGCAGATATTTGTTTGATAGAATATGGAGTTTTGGTACTTGTTGGAATAAAAGTAGCACATCACATGGTCGACGAATTTTCCACAGGGATGTTGAAAAGGAAGAATTCCAGTATGCAAGTACTCAATGTCTCTCATCTTACTACAGTGTATTTGTGGTTCGCCTAGCAATCATGGTCATGCTAGCCATCTTGATTGGGCTGCTCACCATACTAACATGGCATTTCACAAAGATTTATACAGCAAAATCACTTAATAGCTTAGCATATGGCCTTCGTTATGAACTTCTACAACGGCCCATCTTGCGGATGTGGAATATCTTGAATTCTACTGCTGAAATTACAACAGCTCAGGTCAAGCTCTCTCAGTATGTAATCAGAAAGTACAGCAATCCTGCTGATCAAGCTGAACAAGTTGAGCTCTATGAATCTATGAGGGCAGTCACGTGGGCGCTGTTTGCCAGTTACAAAGCACTCAATTCAATCACCATCAATTACAAAAACGGCTTTGTCCAGGCATTTCACAGAAATCTGAAGGATAACAATACTTTTTACATCTACTCTGATCTTGTAAATTACTCCATAGGTGCTAGTGGCCCAAATGAGATCAACTCACTCTCAGTCTCAACACATCAAGCATGGAACGATAAAGCCATCCGTGGTAATATTTCTGCAAAATGGTACCGTGAACCCCTTGATCCTTTAACTGGTGAGAAGATTGGAAAAGCTATGCAAATAGCACCGGATGATGTAATCAATATTGCTGGCCTTTCCCAAGTACCTGATGGTGTAGCTACATGGCACGTTGCAGTGAGTAAGTTTACAGATTCACCACTGCTTTCAGCAGCACTGCCAGTTTGGGACGCCTCTAATAAGAGCATTGTAGCTGTTGTGGGTGTCACAACTGCACTTTATAGTGTAGGCCAATTAATGAAAGAATTAGTGGAGTTTCATAGTGGTCATATGTATTTGACCTCTCATGAGGGTTACTTACTTGCCACTTCCACGGATGCACCTCTTCTAACAAATTCAACAAAACCACCCAAGCTTAAGATGGCAGTTGATTCTGAAGATGATGTGATAAGATTGGGCGCAGAGTGGTTACAGAGAACCTACGGGAACAATTTCCCTCGAAATCATGAGGTTCATGCAGAGAACGCCAACCTTGGCAACCAGCAATATTACATAGACTCATTCTTCTTAAACTTGAAGAGACTTCCTTTGGTGGGCGTTATCCTCATACCAAGAAAATATATCATGGGGAAGGTTGACGAAAGAGCCTTCAAAACATTGGTTATATTGATATCTGCGGCGTTGTGTATTCTAGTCATTGGATGCGTTTGCATTTTGATACTGACAAATGGGGTATCAAAGGAAATGAAACTAAGAGCAGAACTGATCAGCCATCTGGAAGCAAGAAGAAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTTCTTGCAAATATGAGTCATGAGCTGAGGACACCTATGGCTGCAGTGATTGGATTGCTTGACATTCTTATCTCTGATGATTGTCTCACCAATGAACAGTATGCAACGGTTACTCAGATACGAAAATGTTCAACTGCTCTACTTCGTCTTCTTAACAACATCTTAGATCTCAGCAAGGTGGAATCTGGAAAGTTGGTACTAGAAGATGCAGAATTTGACTTGGAGCGAGAACTTGAAGGGCTTGTAGATATGTTTTCTGTACAGTGCATTAACCACAATGTGGAGACTGTTTTAGACCTTTCTGATGATATGCCAAAGGTGGTTCGGGGTGATTCTGCAAGGGTAGTTCAAATTTTTGCAAACTTAATCAACAATTCCATTAAGTTTACTGCATCGGGTCACGTCATTCTGCGAGGATGGTGTGAGAACCCAGTTTCTTGGAGTGATAATGCAAATTTTCCTCTTGATCAGAAGAAACCGCGGTCTGCACAAAAGATCAGAGCAAAGCAACATGAGAACCATGTAAAGAAGGCACCCAAGAAAGACAACAAAATGATTCTTTGGTTTGAAGTTGACGACACAGGCTGTGGTATTGATCCAAGTAAATGGGATTCTGTTTTTGAAAGCTTTGAGCAAGCAGATCCTTCAACTACTAGACTGCATGGAGGCACAGGTCTCGGACTTTGTATTGTCAGAACTTTGGTTAATAAGATGGGCGGAAATATCAAGGTCGTCGAAAAGGAGGGCCCAGGAACTCTGATGCGATTATCACTGCTTCTAAGTGCACCCATTGATGCCACAGAACAACATTGTCAACTAGATTTTGCAGACAATGGCTTAGTGGTGTTGCTGGCATTGCATGGGAGCATGAGTCGATCAATCACATCTAAATGGTTACAGAAAAATAGAGTGTGTACTATGGAGGCATCTGAATGGAATGGACTCACACAAATTCTGAGGGAACTCTTTCGTGCAAGAAGTTCAATCCAGAATAATGGCTTTGACATGCACTATCCAGTAAATGAGGCATTCAGAGCTAAATTGCTCAAGATACAAGAAATGAGGAACCCAACTTTTGTCATTGTTGTTGACATAGGGCTACTTGACTTGAGCACAGATATATGGAAGGAACAGCTTAACTTCCTTCACAAGTACTTTGGGAGAGCAAAGTTCGTATGGTTGCTAAATCATGACACCTCCAATACATTAAAGATGGAGCTGCGTAGGAAAGGACATATACTGATGGCTAACAAACCGCTTTACAAGGCAAAATTGGTTCATATTTTGGAAGCTATCATACAAGAGAGAAATTTTGAGTTTCACCCGAAAAGTATAGCTGCTCCAAGAATTACAACGAAGGAGGACGATCTGCATGAGTTTCTGGAGACTGATTCTACTCATTTTGATGCTACCGGCTCTGATGGTTCTGACATATCTGAGATGGGCGGCTCTAATTCTAGCAGTCCAAACGGAGATAGACAAAGACAAAACATTGCAAAATCAAGTCTATCATCACAATCCCAGACCATAAACAACTGCCAAGTTGGACTAACCGATGAATATCCAGAAGATAATAATTCAAGGAAAGAGGAGTCATGTCAAACCAGCCCCAATTCCCATGATGTCCCTGAAGATGCAGAACCAAAATTGATGTCCAATAAACAAGCATCCTTTCCAACAGAAACTCAATGCGAAAATTCTGAAGGTGGTGATACACATATGGTCAATGGCTCAAGTAAAGCAGTGAATGGAAAGAAACCTCTTGAAGGCTTAAGGATCTTGCTTGCAGAAGATACTCCAGTGCTTCAAAGGGTCGCAACCATAATGCTTGAAAAAATGGGAGCTACAGTTGTTGCAGTTGGGGATGGGCTGCAGGCAGTGGAGGCTCTGAATTGCATGCTTGGTGATGAAGATTGTAGAAGGGAGTCTCTTCTGAAGGAAAGAAACACAAGACCTCAAATAGAAGTTTCCAGCAGCCCTGCATATGACTTGGTCCTAATGGATTGTCAGATGCCGAAGATGGACGGTTATGAATCAACAAAAGCAATCAGGAAATCAGAAGTGGGTTCTGGCATACACATTCCCATTGTTGCTCTTACAGCCCATGCAATGCCCTCAGATGAAGCCAAATGCTTGGAGGTGGGCATGGATGCTTACTTAACAAAACCAATTGACTTCAAGTTAATGGTGTCCACCATACTTTCACTCACCAAAAGAACTTCTTGATTTTTCACATTATGCTGAAGCTGACAAAGAGACAGTAAATTAGTTACCTCCTAGCTATACATATCTAAAAGCAGAGCTTAATATGAGCCCTTGTATAAATACGATCCAATTTTCCTATCTAACTTGTATTAATAGTTACTTGTTTGTTTCTTCTATCATTTCAATTTCAGAAGCCAAGTTCCATCTGCATAAAA 3950 0.4116 MAENKDFGSCESSVCSSSSSSPMGSKCRYLFDRIWSFGTCWNKSSTSHGRRIFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTAKSLNSLAYGLRYELLQRPILRMWNILNSTAEITTAQVKLSQYVIRKYSNPADQAEQVELYESMRAVTWALFASYKALNSITINYKNGFVQAFHRNLKDNNTFYIYSDLVNYSIGASGPNEINSLSVSTHQAWNDKAIRGNISAKWYREPLDPLTGEKIGKAMQIAPDDVINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDASNKSIVAVVGVTTALYSVGQLMKELVEFHSGHMYLTSHEGYLLATSTDAPLLTNSTKPPKLKMAVDSEDDVIRLGAEWLQRTYGNNFPRNHEVHAENANLGNQQYYIDSFFLNLKRLPLVGVILIPRKYIMGKVDERAFKTLVILISAALCILVIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLERELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTASGHVILRGWCENPVSWSDNANFPLDQKKPRSAQKIRAKQHENHVKKAPKKDNKMILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGNIKVVEKEGPGTLMRLSLLLSAPIDATEQHCQLDFADNGLVVLLALHGSMSRSITSKWLQKNRVCTMEASEWNGLTQILRELFRARSSIQNNGFDMHYPVNEAFRAKLLKIQEMRNPTFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWLLNHDTSNTLKMELRRKGHILMANKPLYKAKLVHILEAIIQERNFEFHPKSIAAPRITTKEDDLHEFLETDSTHFDATGSDGSDISEMGGSNSSSPNGDRQRQNIAKSSLSSQSQTINNCQVGLTDEYPEDNNSRKEESCQTSPNSHDVPEDAEPKLMSNKQASFPTETQCENSEGGDTHMVNGSSKAVNGKKPLEGLRILLAEDTPVLQRVATIMLEKMGATVVAVGDGLQAVEALNCMLGDEDCRRESLLKERNTRPQIEVSSSPAYDLVLMDCQMPKMDGYESTKAIRKSEVGSGIHIPIVALTAHAMPSDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTKRTS 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00627 1251 CDD REC_hyHK_CKI1_RcsC-like 1103 1243 - -
Bach10g00627 1251 MobiDBLite consensus disorder prediction 1 24 - -
Bach10g00627 1251 Gene3D - 495 574 - -
Bach10g00627 1251 MobiDBLite consensus disorder prediction 973 1093 - -
Bach10g00627 1251 ProSiteProfiles Histidine kinase domain profile. 514 772 IPR005467 -
Bach10g00627 1251 Pfam Response regulator receiver domain 1103 1242 IPR001789 GO:0000160
Bach10g00627 1251 CDD HisKA 508 569 IPR003661 GO:0000155|GO:0007165
Bach10g00627 1251 FunFam Histidine kinase 1-like protein 495 574 - -
Bach10g00627 1251 Pfam His Kinase A (phospho-acceptor) domain 508 573 IPR003661 GO:0000155|GO:0007165
Bach10g00627 1251 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 562 768 IPR036890 -
Bach10g00627 1251 PANTHER TWO-COMPONENT HISTIDINE KINASE 62 776 - -
Bach10g00627 1251 MobiDBLite consensus disorder prediction 1063 1089 - -
Bach10g00627 1251 Gene3D - 575 772 IPR036890 -
Bach10g00627 1251 Gene3D - 1082 1249 - -
Bach10g00627 1251 MobiDBLite consensus disorder prediction 976 1031 - -
Bach10g00627 1251 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 620 770 IPR003594 -
Bach10g00627 1251 PRINTS Bacterial sensor protein C-terminal signature 715 725 IPR004358 GO:0016310|GO:0016772
Bach10g00627 1251 PRINTS Bacterial sensor protein C-terminal signature 732 750 IPR004358 GO:0016310|GO:0016772
Bach10g00627 1251 PRINTS Bacterial sensor protein C-terminal signature 697 711 IPR004358 GO:0016310|GO:0016772
Bach10g00627 1251 PRINTS Bacterial sensor protein C-terminal signature 756 769 IPR004358 GO:0016310|GO:0016772
Bach10g00627 1251 ProSiteProfiles Response regulatory domain profile. 1102 1247 IPR001789 GO:0000160
Bach10g00627 1251 SUPERFAMILY CheY-like 1099 1248 IPR011006 -
Bach10g00627 1251 SMART REC_2 1101 1243 IPR001789 GO:0000160
Bach10g00627 1251 SMART HisKA_10 507 573 IPR003661 GO:0000155|GO:0007165
Bach10g00627 1251 SMART HKATPase_4 620 772 IPR003594 -
Bach10g00627 1251 MobiDBLite consensus disorder prediction 9 24 - -
Bach10g00627 1251 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 494 574 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00627 Bach-Chr10 4445747 4452147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00627 21 1248 Histidine Kinase Gene Family AT2G17820 63.936 0.0 1576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach10g00627 HATPase_c 4.5e-22 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00752 4 5032934 5039917 Bach10g00627 10 4445747 4452147 BWGD
Bach10g00627 10 4445747 4452147 Bach10g00627 10 4445747 4452147 ECH