Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00490 ATGATCCAAGAAATGTTAGGAGGTGCTGGCCTTATACCAGGGGAAAGAAAATTCTCCATTAATGGAGGGGTTTTAGCTTCCACACCATCTCCTAACTCTCTCCATTCTTCTCCATGTCCAGATTCTTCCACAACCACCAACACCAATACTTCCACTACTAGCACCACTACCACCACTGCTGCCACCGCTACCTCGTCGAATTCAGATAACCAAAATCTGAGGTGCCCACGTTGTGACTCATCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCATTTCTGCAAGACATGTCGCCGGTACTGGACAAAAGGTGGTGCTCTGAGGAACGTTCCAATCGGAGGCGGTTGCCGGAAAAACAAGAACATCGGCATGTCCAACACCGTGGCAAAGGCGAGTGTGGCTAAGATGAAAACAGTTGCATCTGAGCTTGGAAGGTCAGGATTTGGGGGTGGGTTTGATCATGAGCTTCCATCAAGTCCAGTTCTATGGGGCTCGCCACAAAATTCTCATCTGTTGGCTTTACTGAGAGCTGGGAAAAACCAAAACCCTAACCCTAGCCCTCTGTCCAATGGTGTTGTCGTGAAGGAAGAGGGGCACTTAATGGGAACTCACATGGTGACTGAGCCATTGGTTGCAAACGGGATATTAAATGCTCGAACCCTAGGTTTTGATCCTATAGGACAAGTTCCTTCTCTTGGGTTGTGCAGCTCTTTTTGGAGGAACAATCAAGATCAACCTCAACAGCAAAACGGTAACTTTATACTTGGTGAACATCAGAACAGTGGAATTCAGGAACTCTATCAGAGGCTCAGGTCATCATCAGCTAACTATTGTGGTGATAACTCAACGTTGGTGCTGGGCAACGTGGCTTCGTCATCTTCCTCTTCTTTATCCATATTGGAGCCAGCTCCAGTTGCTGGTGGTGAATTGGGGTACTGGAATCCAACCCTTTCGTGGCCTGATCTTCCCACAACCAATGGTGCATATCCATAA 1011 0.4748 MIQEMLGGAGLIPGERKFSINGGVLASTPSPNSLHSSPCPDSSTTTNTNTSTTSTTTTTAATATSSNSDNQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNIGMSNTVAKASVAKMKTVASELGRSGFGGGFDHELPSSPVLWGSPQNSHLLALLRAGKNQNPNPSPLSNGVVVKEEGHLMGTHMVTEPLVANGILNARTLGFDPIGQVPSLGLCSSFWRNNQDQPQQQNGNFILGEHQNSGIQELYQRLRSSSANYCGDNSTLVLGNVASSSSSSLSILEPAPVAGGELGYWNPTLSWPDLPTTNGAYP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00490 336 MobiDBLite consensus disorder prediction 23 73 - -
Bach10g00490 336 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Bach10g00490 336 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Bach10g00490 336 MobiDBLite consensus disorder prediction 22 73 - -
Bach10g00490 336 Pfam Dof domain, zinc finger 71 127 IPR003851 GO:0003677|GO:0006355
Bach10g00490 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 59 247 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00490 Bach-Chr10 3528027 3529037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00490 55 126 C2C2-Dof Transcription Factor Family AT5G65590 72.222 1.58e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach10g00490 zf-Dof 2.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00490 - - qsu:112033100 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00555 4 3762561 3763583 Bach10g00490 10 3528027 3529037 PCT