Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00429 ATGGCTCTCAGAGAAGCACTAGATGTAGAAAACTCTCCGTTAGTCCTTGATGCCCTCCTCTGTGAAGAAGATTGTTTTGAGGAAGATTTTGGAGAGAATGGTATTGAGGGAGAGCGTCATAACTATGATTCAACTGTGAGAAAGTCGTCATCTTTGCCTTTGATTTTGTTGGACAATGACTTGCTTTCGGAAGATGATGAACTTGTCTCCCTAATCTCTAAAGAGGGAGAGACCCATTTCTGTTTCGGTAATCTAATTGAAGACGGTCCTCTAGGGGGAACTCGTGTTGAGGCTGTGCGATGGATTTCTATAGTTTGTTCGCACCATGGTTTCTCTGTTTTGACTACCGTTCTCGCCGTGAACTTCTTTGATAGGTTCATTACAAGCCGAAGATTTCAGAGGGATAAGCCTTGGATGACACATCTTACTACGGTTGCCTGTTTATCTCTGGCTGCCAAAGTGGAGGAGACCCAAGTGCCACTTCTTTTAGACTTGCAAGTGGAGGAATCGAAGTACCTTTTTGAAGCTAAAACTATACAGAGGATGGAGCTTCTAGTGCTATCAACTCTTAAATGGAGGATGAATCCAGTGACCCCAATTTCCTTCTTCGAACACATTGTGAGAAGGCTCGGTTTGAAGTGCCACTGGCAGTGGGAATTCCTGTGGCAGTGCGAGCGTATTCTTCTCTTTGTCATTGTGGATTCGATGGTTATGAGTTATCCCCCTTCTACATTAGCTGCTGCTATAATGATCCACGTTATTAGAGAGATTGAGCCAAGTAAGGCAATGGACTACAGAAATCAGCTTCTTAGTTTACTCAAAATCAGTGAGGAACTAGTGAGCGAGTGCGACAAACTCATACTGAAACTATTAGGATGCCAGGAAGACGTTCCAAATCTTTGCCGGAAACGCAAGCGCCTATCTGTGGGGAGTAGCTCAAGTGGCGTCACTGATGCATCTTTCAGCTATGATAGCTCAAATGACTCGTGGGCTGTGGCATCATCAGTCTCGTTTTCACTGGAGCCAGTGTTAAAGAGGAGCAGAGCTCAGGAACAGCAGATGCACTTGCATTCCTTAAATCATGTTTCTATTGATGTGCTTAATAGCCCTCGCTAATCATTTTCTTAGTATCTACTGCTCACATGGTGCC 1150 0.4435 MALREALDVENSPLVLDALLCEEDCFEEDFGENGIEGERHNYDSTVRKSSSLPLILLDNDLLSEDDELVSLISKEGETHFCFGNLIEDGPLGGTRVEAVRWISIVCSHHGFSVLTTVLAVNFFDRFITSRRFQRDKPWMTHLTTVACLSLAAKVEETQVPLLLDLQVEESKYLFEAKTIQRMELLVLSTLKWRMNPVTPISFFEHIVRRLGLKCHWQWEFLWQCERILLFVIVDSMVMSYPPSTLAAAIMIHVIREIEPSKAMDYRNQLLSLLKISEELVSECDKLILKLLGCQEDVPNLCRKRKRLSVGSSSSGVTDASFSYDSSNDSWAVASSVSFSLEPVLKRSRAQEQQMHLHSLNHVSIDVLNSPR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00429 371 SMART cyclin_7 100 188 IPR013763 -
Bach10g00429 371 Pfam Cyclin, N-terminal domain 94 195 IPR006671 -
Bach10g00429 371 SUPERFAMILY Cyclin-like 179 292 IPR036915 -
Bach10g00429 371 FunFam CYCLIN D32 196 285 - -
Bach10g00429 371 CDD CYCLIN_AtCycD-like_rpt1 95 192 - -
Bach10g00429 371 PANTHER CYCLINS 86 288 IPR039361 -
Bach10g00429 371 Pfam Cyclin, C-terminal domain 197 294 IPR004367 -
Bach10g00429 371 SUPERFAMILY Cyclin-like 64 195 IPR036915 -
Bach10g00429 371 FunFam D6-type cyclin 82 195 - -
Bach10g00429 371 SMART Cyclin_C_2 197 318 IPR004367 -
Bach10g00429 371 Gene3D - 94 195 - -
Bach10g00429 371 CDD CYCLIN_AtCycD-like_rpt2 197 287 - -
Bach10g00429 371 Gene3D - 196 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00429 Bach-Chr10 3017735 3019257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00429 15 361 Core Cell Cycle Gene Families AT5G67260 52.260 1.90e-106 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00429 10 3017735 3019257 Bach4g00490 4 3288789 3290265 BWGD
Bach4g00490 4 3288789 3290265 Bach10g00429 10 3017735 3019257 ECH
Bach12g00273 12 1832855 1834462 Bach10g00429 10 3017735 3019257 ECH
Bach3g02214 3 29125297 29126760 Bach10g00429 10 3017735 3019257 ECH
Bach10g00429 10 3017735 3019257 Bach10g00429 10 3017735 3019257 ECH