LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g03619	GACTCATGGGACGAGCCCTTCCCGCCGGCGTCATCGAAGCTCCGGCTTATGTGCAGCTATGGCGGCCACATCGTTCCCCGGCCTCACGACAAGTCGCTCTGCTATGTCGGCGGCGACACGCGAATCGTGGTGGTTGAGCGAACAACTTCACTCGCGGACCTGTCCACGCGCCTCTCAAAGACGTTCCTGAATGGAAGACCGTTCAGCCTCAAGTACCAGCTCCCGAACGAAGACCTGGATTCTTTGATTTCTGTTACCACCGACGAGGACCTCGACAACATGATCGACGAGTATGACCGAACCAACAACAACCCTTCCGTGAAACCCTCGCGAATTCGGCTCTTCCTCTTCCCAACAAAGCCTGAATCGGTTCAGAGTATTCCGCCCATTCTAGAAAGTTCCGCCAAGTCTGATGATTGGTTCCTCAACGCCCTAAACGGCTCTGGATTGCTCAACCGGGGTTTCTCTGACTCTGCCTCTGTGAATTGCCTTTTGGGTCTCGACGACGATGCTTCGGGGAATAATGTTGACCATAGCTCAAGGGACCCTGTCGAGGCTTCTTCTCAGCCTGGATCTTTTGGAAATGGCAAGAATCCCAAACAGGAGGTTCATTCTGTTCCCGATTCGCCTATGCTGGAGACTACTTCTTCGTTTGGCTCTACTTCTTCATCGCCGTCGCTGGCCAATTTGCCGCCGATTAGGGTTCATGTGGAAGATGGCAGCGGTGGCGGCGGGGTTAGGATGGTGCAGGATCACAAGGTTTTGGGAATTGAGGAGCAGTTTGCGCAGATGGGTGTGAGTGTTGCCGGTGGATTGGGGCAGAAGCAAGACGAGGGGCTGGTGGTGCTTTCTTCGCCTCCGCCTCCGCCTGTGCCGGTCACTCTATCTGCCGCTGGGGTGGGTGTGCCTGTTAGCTCAGCGTTGGTGTCTGGGGAGTACCAGAACAGGGTTTTCTCCGATGATGAGAGATCGGATCATAGCGTGCCTGTGGGTTACAGAAAACCACCGACACCTCAGCCACAGTTGCAGCAACAACCACAGCTTCAGCCTCAGCCTCAGTCTCAGCCGCAGCAAACACAGTCACAGTCACAACCTCAACATCAACAGGTTTTACAGCCTCAATTTCAACCCAAGTCAACTGGCGTCGTTGATTTGCCTTCTCCAGATTCAGTTTCAAGTGATAGTAGTCTTTCAAATGCAATCTCTCGGCAAAAAGCTGTGATCTATCAAGACCAAGTTCAGATTCAGCCTGGGACTACAAGGGTTCCTAGTAACCCGGTTGATCCAAAACTAAACGTGTCCGATCCTCATGGTCGGATCCAGATGCAGCAGCTTGTACAGGACCCAGGATACTTGTTGCAACAGCAATTTGAACAACAGCCGCCGCCACAGCAGCCTCAACAGCAACAACAGCAGCAGTTCATTCATGGTACTCATTTCATTCACCATGCTCCTCCTGGGGCCGTGCCGATTTCCGCCTACTATCCAGTATATCCTTCCCAGCAACAGTCCCACCCCCAGGTTTACTACGTTCCTGCGAGACAGCCCCCGGCTTACAACATGCCTGTTCAGCAGCCTAACATGGCTGAATCCGCCTCAAACATTCCTTCCAGCCGTCCCCAGACTCCACCAAATCCCACCACATTGGTTCCACCTTCTGCAGCTTACAACCCCATGAGAAATGCTCCCATGCCCAAGACTGAAATGACGGCAGCTGCATACAGAGCTGTGAGTGCCGGTACCCCTCAATTGGTTCAAGTTCCTACCAGTCAGCATCAGCAACAGTATGTTGCTTACTCCCAGATTCACCACCCTTCTCAGTCTATTGCTCAAAATTCTGCTCCCCCTCCTAATTATGCTTTTGATTATGCGGATCCGGCACATGCTCAGATATACTACTCTCAACCTCTGGCACCCTCAATGCCTTCTCAGTACCAGACCATGACAGCCGCTGCCATGGTAATGCCGGACGGTTCCACTCAGCAACCCTCGGACAACATGAAGCAACAGATAAGAACTTCACAGCCATTATAA	2034	0.5275	MEAQPPTPPHTAQPPPLSSVAPPPQQPQQPVPPPSSHLNYPDSVDSSPRSRNTDSWDEPFPPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERTTSLADLSTRLSKTFLNGRPFSLKYQLPNEDLDSLISVTTDEDLDNMIDEYDRTNNNPSVKPSRIRLFLFPTKPESVQSIPPILESSAKSDDWFLNALNGSGLLNRGFSDSASVNCLLGLDDDASGNNVDHSSRDPVEASSQPGSFGNGKNPKQEVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDGSGGGGVRMVQDHKVLGIEEQFAQMGVSVAGGLGQKQDEGLVVLSSPPPPPVPVTLSAAGVGVPVSSALVSGEYQNRVFSDDERSDHSVPVGYRKPPTPQPQLQQQPQLQPQPQSQPQQTQSQSQPQHQQVLQPQFQPKSTGVVDLPSPDSVSSDSSLSNAISRQKAVIYQDQVQIQPGTTRVPSNPVDPKLNVSDPHGRIQMQQLVQDPGYLLQQQFEQQPPPQQPQQQQQQQFIHGTHFIHHAPPGAVPISAYYPVYPSQQQSHPQVYYVPARQPPAYNMPVQQPNMAESASNIPSSRPQTPPNPTTLVPPSAAYNPMRNAPMPKTEMTAAAYRAVSAGTPQLVQVPTSQHQQQYVAYSQIHHPSQSIAQNSAPPPNYAFDYADPAHAQIYYSQPLAPSMPSQYQTMTAAAMVMPDGSTQQPSDNMKQQIRTSQPL	730

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	1	37	-	-
	Arst9g03619	730	Pfam	PB1 domain	82	171	IPR000270	GO:0005515
	Arst9g03619	730	SUPERFAMILY	CAD & PB1 domains	82	180	-	-
	Arst9g03619	730	SMART	PB1_new	81	172	IPR000270	GO:0005515
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	39	59	-	-
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	261	282	-	-
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	368	451	-	-
	Arst9g03619	730	FunFam	Octicosapeptide/phox/Bem1p domain kinase superfamily protein	86	172	-	-
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	230	252	-	-
	Arst9g03619	730	Gene3D	-	86	170	-	-
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	708	730	-	-
	Arst9g03619	730	PANTHER	OS05G0427100 PROTEIN-RELATED	39	422	-	-
	Arst9g03619	730	CDD	PB1_UP2	70	170	-	-
	Arst9g03619	730	ProSiteProfiles	PB1 domain profile.	66	172	IPR000270	GO:0005515
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	399	451	-	-
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	581	609	-	-
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	1	60	-	-
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	225	292	-	-
	Arst9g03619	730	MobiDBLite	consensus disorder prediction	468	488	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g03619	Arst-Chr9	112480831	112483411	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst9g03619	43	200	MAP Kinase Kinase Kinase	AT3G46920	35.542	9.10e-26	112

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst9g03619	9	112480831	112483411	Arst9g03619	9	112480831	112483411	ECH
	Arst9g03619	9	112480831	112483411	Arst5g03414	5	93062483	93065227	ECH