Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03601 ATGCCCTTCATTATTCTCTCTTCTTCACAACCTTCTTTGTTGACCGCCAAAGCCCTAAAACCTTCGATTCACGCCATGAAGGACCGCCCTACGCTGTCCTCTTATGGCGCCATTTACGTTCCCCCGCACCACCGCCTCCGCTCCGTCATCACTTCCGCCAATTACAACTCCTCCGCTCCCTCTGTAGCCAAGCTCCGCGATCACCGTGGTGCAGCTCTAAACCCTAGACCCGTTGTTTCAGCTGCTCCTACCACTGTGCATCGCTCGCAAACGACGTTGCCGGAGCAAATTCCTGACAAGGGGAATTCGCGCTTTGTTTCAGCTTACGACGACGTGGTTTCCGAGGAAGGCTCCGATCGTGAATTCGAGGCTCCCTCATTTCGGAGTGCTTCACCAAATGATAATGTTGATGAGTGGAAGAGGAAGCTAACCTTGCTCTTAAACGACAAGAGTAAGCAAGAGTTGTTGTCCAGGGAGAAAAAGGATAGGCGTGATTTTGATCAAATTGCGCTTTTGGCAAGCAGAATGGGGCTGTATAGCCACATGTATGCAAAGGTTGTTGTCTTCAGTAAGGTTCCACTTCCAAACTATAGATATGACTTGGATGATAGGCGGCCGCAGAGGGAGGTGAGCATGCCTATAACTTTGTTAAGGCGAGTTGATGCATACTTTGAGGAACACCTTACCCGAAAGTCCAAGATGAAGGAAAGCTTTTCAGATGTATCATTTACAAGATCAAGCAGTAACAGTAGTATTGGTACAGATGAAGGGCTTTTTGAGCACCCTGAGCCACTTGCATCTAGTAAGGCTGTTGGGGAGAAAATACTTAGGCGGAGGAGCTTGCAAATGCATGATCAGCAGCAAGCATGGCAGGAATCTCCAGAAGGAAGAAGAATGCTAGAATTTCGCAGGAGTCTCCCTGCTTATAAAGAGAAAGAAGCAATATTGTCTCTCTTATCAAGAAATCAGGTAGTTGTCATCTCAGGCGAAACAGGTTGTGGCAAGACAACTCAAATTCCACAGTTTATTTTAGAATCTGAGATAGAATCAGTTCGAGGAGCTGCTTGTAATATCATATGCACACAACCAAGACGCATATCCGCTATGTCTGTTTCTGAAAGGGTTGCCTACGAGAGAGGGGAGAAATTGGGTGAATCTGTTGGATATAAAGTTCGATTGGAGGGTATGAAGGGGAGAGATACCCATCTTCTCTTTTGCACCACGGGCATCTTATTAAGAAGATTGCTAGCTGATAGAAACTTAACAGGTGTAACTCATGTTATCGTGGATGAAATTCATGAGCGTGGGATGAATGAAGATTTTCTGCTTATCGTCCTTAAAGATCTCCTTCCGCACCGACCTGAAATGAAACTGATTTTGATGAGTGCTACCCTAGATTCAGAGCTCTTCTCTTCTTACTTTAATGGGGCACCAGTTATGAATATTCCGGGCTTCACATATCCCGTTAGAACTCATTTTTTGGAGGACATTCTTGAAATGACGGGCTACAGATTGACAACTTCTAATCAAATTGATGATTATGGTCAAGAAAGGATGTGGAAAATGAACAAACAGGTCCCAAGAAAGAGGAAAAGCCAAATTGCTTATGTTGTCGAGGATGCTATTAGAGCTGCTGATTTCAAAGATTACAGCCCACAGACACAGGAGTCTTTGTTGTGTTGGAATCCTGATTGTATTGGATTTAGTCTCATAGAATATATCCTATGCATGATATGTGAGAATGAAAGGCCTGGTGCTGTTTTAGTTTTTATGACTGGATGGGATGATATAAGCACTTTGAAAGAGAAGTTTTTGGCTCATCCTGTCTTAGGAGATCCAAATCGAGTTTTGTTGCTTACCTGTCATGGCTCAATGGGCAGTTCAGAACAGAGGTTAATATTTGAAGAACCCAAAGATGGAGTAAGAAAAATAGTGCTTGCAACAAATATCGCTGAAACGAGTATCACAATAAATGACGTTGTTTTTGTGCTTGACTGCGGAAAAGCAAAAGAAACATCATATGATGCACTGAATAACACGCCCTGTTTGCTTCCAACATGGATCTCTAAGGTTTCTGCCCAACAGAGACGAGGAAGAGCTGGTCGTGTTCAACCTGGAGTGTGTTACCATATCTATCCTAGATGTGTATATGATGCATTTGCTGAGTATCAGTTGCCAGAAATTTTGAGGACACCCTTGCAATCTCTGTGTCTGCAAATAAAAAGTCTAAGACTTGGAAGCATACCTGAGTTCTTGTCTAGGGCTTTGCAGTCTCCGGAGATCCTTGCGGTACAAAATGCTATTGAGTATTTGAAAATAATTGGGGCTTTGGATGAGAATGAGAATTTGACTACTCTAGGTAGGTTTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCGCTTATATTAGGGGCTATCTTCAATTGCCTGGATCCAATATTAACTGTGGCTGCTGGTCTTAGTGTGAGAGATCCTTTCCTAACACCACTGGACAAAAAAGACCTTGCAGAGGCAGCAAAATCTCAGTTTGCTGGAGCATATAGTGACCACCTTGCACTTATAAAGGCTTACGAGGGTTGGAAAGATGCAGAATTAGACATGGGAGGATGTGAATATTGCTGGAAAAATTTTCTTTCAGCACAATCAATGAAAGCTATTGATGCTCTTAGGAGAGAGTTCAGATGCCTGCTCAAGGATATTGGATTAGTTGATAGCAATACAGCCAACTGCAACTTGTGGAGCTGTGATGTGAATCTTATCCGGGCAGTTATTTGCTATGGTCTATATCCTGGAATTTGCGCTGTTGTGCACAATGAAAAGTCATTCTCTTTGAAAACAATGGAGGATGGTCAAGTGCTCCTATATTCGAACTCCGTCAATGCTCGGGAAACTAGAATTCCATATCCATGGTTACTTTTTAATGAGAAGATAAAAGTGAACTCTGTTTTCCTCCGCGACTCAACAGCTGTGCCTGATGCAGTGGTGCTTCTGTTTGGTGGAAACTTATTGAAAGGGGATGCTGATGGCCACCTAAAAATGTTGGGAGGATATCTGGAGTTCTTCATGGAACCTCCTGTTGCTGATCTGTACCAGTGTGTAAAGAGAGAACTTGATGACTTAATTCAAAGAAAACTACTTTTTCCAAAGATGAGCATACACTTGTATGATGAACTCCTATCAGCAGTGCGGTTGCTGATTTCCATAGACACATGTGAAGGCAAATTTGTATTTGGTCGTCGGGTCTTTAAACCAGCAAAGTCAACAGTGATGGCCACATCACATCCAGCATCGATTTCAAGGACTGAGAGTGGCCCTGGGGGTGATAATTCTAAAAGTCAGCTCCAGACCTTACTCACAAGAGCAGGATATGCTGCACCCAGCTACAAGACTAAACAATTGAAGAATAATCAGTTTCGGGCTACAGTTGAGTTCAATGGAATGCAGATAATGGGCCAACCCTGTAGCAATAAGAAAAGTGCAGAAAAAGATGCTGCAGCTGAGGCCTTGCAGTGGCTAATGGGTGGAAAACAGTCAGGCAGTGAGTATATCAGTCACATGTCCAAGTTGCTAAAGAAAAGTAAGAAGGATCACAGCTGA 3594 0.4335 MPFIILSSSQPSLLTAKALKPSIHAMKDRPTLSSYGAIYVPPHHRLRSVITSANYNSSAPSVAKLRDHRGAALNPRPVVSAAPTTVHRSQTTLPEQIPDKGNSRFVSAYDDVVSEEGSDREFEAPSFRSASPNDNVDEWKRKLTLLLNDKSKQELLSREKKDRRDFDQIALLASRMGLYSHMYAKVVVFSKVPLPNYRYDLDDRRPQREVSMPITLLRRVDAYFEEHLTRKSKMKESFSDVSFTRSSSNSSIGTDEGLFEHPEPLASSKAVGEKILRRRSLQMHDQQQAWQESPEGRRMLEFRRSLPAYKEKEAILSLLSRNQVVVISGETGCGKTTQIPQFILESEIESVRGAACNIICTQPRRISAMSVSERVAYERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRNLTGVTHVIVDEIHERGMNEDFLLIVLKDLLPHRPEMKLILMSATLDSELFSSYFNGAPVMNIPGFTYPVRTHFLEDILEMTGYRLTTSNQIDDYGQERMWKMNKQVPRKRKSQIAYVVEDAIRAADFKDYSPQTQESLLCWNPDCIGFSLIEYILCMICENERPGAVLVFMTGWDDISTLKEKFLAHPVLGDPNRVLLLTCHGSMGSSEQRLIFEEPKDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGVCYHIYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSIPEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTTLGRFFPLSLSLSLSLILGAIFNCLDPILTVAAGLSVRDPFLTPLDKKDLAEAAKSQFAGAYSDHLALIKAYEGWKDAELDMGGCEYCWKNFLSAQSMKAIDALRREFRCLLKDIGLVDSNTANCNLWSCDVNLIRAVICYGLYPGICAVVHNEKSFSLKTMEDGQVLLYSNSVNARETRIPYPWLLFNEKIKVNSVFLRDSTAVPDAVVLLFGGNLLKGDADGHLKMLGGYLEFFMEPPVADLYQCVKRELDDLIQRKLLFPKMSIHLYDELLSAVRLLISIDTCEGKFVFGRRVFKPAKSTVMATSHPASISRTESGPGGDNSKSQLQTLLTRAGYAAPSYKTKQLKNNQFRATVEFNGMQIMGQPCSNKKSAEKDAAAEALQWLMGGKQSGSEYISHMSKLLKKSKKDHS 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03601 1197 Pfam Double-stranded RNA binding motif 1109 1171 IPR014720 -
Arst9g03601 1197 Gene3D - 568 723 IPR027417 -
Arst9g03601 1197 Gene3D - 265 484 IPR027417 -
Arst9g03601 1197 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1108 1173 IPR014720 -
Arst9g03601 1197 MobiDBLite consensus disorder prediction 239 261 - -
Arst9g03601 1197 PANTHER ATP-DEPENDENT RNA HELICASE 256 1020 - -
Arst9g03601 1197 Pfam Helicase associated domain (HA2) 767 837 IPR007502 GO:0004386
Arst9g03601 1197 MobiDBLite consensus disorder prediction 1092 1111 - -
Arst9g03601 1197 SMART helicmild6 598 704 IPR001650 -
Arst9g03601 1197 CDD DEXHc_RHA-like 322 482 - -
Arst9g03601 1197 Gene3D - 746 849 - -
Arst9g03601 1197 CDD SF2_C_RHA 487 712 - -
Arst9g03601 1197 MobiDBLite consensus disorder prediction 239 255 - -
Arst9g03601 1197 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 316 483 IPR014001 -
Arst9g03601 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 869 IPR027417 -
Arst9g03601 1197 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 919 1000 IPR011709 -
Arst9g03601 1197 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 570 744 IPR001650 -
Arst9g03601 1197 FunFam DExH-box ATP-dependent RNA helicase DExH3 260 484 - -
Arst9g03601 1197 Pfam Helicase conserved C-terminal domain 571 703 IPR001650 -
Arst9g03601 1197 SMART ha2_5 766 853 IPR007502 GO:0004386
Arst9g03601 1197 FunFam DExH-box ATP-dependent RNA helicase DExH3 1087 1176 - -
Arst9g03601 1197 Pfam DEAD/DEAH box helicase 313 467 IPR011545 GO:0003676|GO:0005524
Arst9g03601 1197 SMART ultradead3 303 497 IPR014001 -
Arst9g03601 1197 FunFam Putative ATP-dependent RNA helicase DHX36 746 847 - -
Arst9g03601 1197 FunFam DExH-box ATP-dependent RNA helicase DExH3 566 722 - -
Arst9g03601 1197 SMART DRBM_3 1109 1172 IPR014720 -
Arst9g03601 1197 SUPERFAMILY dsRNA-binding domain-like 1104 1181 - -
Arst9g03601 1197 Gene3D - 1084 1176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03601 Arst-Chr9 112273835 112283122 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03601 9 112273835 112283122 Arst9g03601 9 112273835 112283122 ECH