Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03581 ATGGCCGCGACGCCGTCGTCCTCCGCCGCGGGAGCCACCAACATCATGCTCGCAATTTTCGAGAAGAAGACTAATTCCGTCGACCTGTACCGCCCTCTACGCAACTACATCGCATTCAACTACTCCGAGCGTGAGGCCCAGAACCTCGAAGACGATCTCCAAACCCTAAAGCAGCAACGCGCTGACATCGAGCGCCACTCCGATCCCTCCCTCCCTTCCCGCCGCGACCTCCTCCAGTCCTACTTCAGAGCCCTCTGCCTCGTTGAGACCCGATTCCCAATCTCCCCCGACCCGGCGCACGTCAACGCCCTCACCTTCGTCTGGTTCGACGCCTTCAAGCCCAAGCAGAAGTCTTCCCAGCAGAACATCCATCTCGAGAAGGCTTCCGTACTCTTCAATTTGGGAGCAGTGTACAGCCAAATTGGGCTTTCGTATGATCGCAACACCGTGGACGGCCGTCGCCAGGCCTCACATGCGTTTATCGCAGCCGCGGGGGCGTTTGCTTATTTGAGGGATAATGCGTCCATGAAAGCCTCCATTGGAGGATCCGCCACCGTGGACATCTCGGGGGAGTGCGCTGGGATGCTTGAGAAGCTGATGCTAGCTCAGGCTCAAGAGTGCGTCTTTGAGAACAGTATCGCCAAAGGAAGCACACCAGGTGTTTGTTCCAAGATCTCTAGGCAGGTTGGGCTGTATTATGAGGAAGCTTTAGCTGCATTGAATGTTGCACCTTTAAACACACATTTTGATAAGTCGTGGATAGCGCATGTCCAGCTGAAATCGGCTTTGTTCTATGCTGAAGCTTGCTTTAGGTATGGATTGGAGCTACATGAAAAAGAAGAAATAGCAGAGGAGATTGCGCGACTCAGGAGTGCCATTAACGTGCTAACTGAGGCGAAGAAAAATTCAAAGGGTGCTGCAGCACAGATTCTCGATGCAATTGGCAAGTTAGAGGCCAATATTAACCGAAACCTGGAAAGGGCTGTCAAGGAGAACGACAGGGTTTACCTCATGAGAGTTCCTTCTCCCAGTTCCCTACCACCTCTTGCAGCATTTTCTATGGTGAAGCCAATGGCAATGAGTGAGGTGCTGGATGCAAGCAAAGAGAAGATGTTTGCTAGCCTTGTACCTGACAGCAGTACAAAGGCCCTCTCCAGGTATACTGAAATGGTAGATGACATTATAAGAATGCAGGCTGAGAAGCTACAGCAAGCTAGTGAGCTAACACGAGTTAGGCTCAAGGAAATGGAACTTCCGGATTCTATTCTTGCTTTGGAAGGAAATTTTACTCTTCCAACAAGTCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGACCTGCTGGCTTGGAAGCAGAGTTGCAGCAACTGAGGGACCTAAGGAGGGTGAATCAAGAACTATTGGTCCAGACTGAGGAGCTGTTGCAAAAGGAAGCAAGAGAAGATTCTCAATTTAGAAGCCAGTTTGGGACAAAATGGACTAGACCTCAATCAAGCACTTTGACAAAGAACTTGCAGGATAGGCTGAACAGGTTTGCAGGTAACTTGAAGCAAGCTGCTGAAAGTGATGGTCGAATTGAGCGTTCGGTTAGAGAAAATTCGGCATTCATGTCAATCCTTGATGCCCGCCCGATTGAATCCGCACTTCCAACCTTGGCAAGGCCGATTATGTCTTTAGATCAAAATGAAGATGCTATTGTGGGATCTCTCAAGCAGAGCCTGAGGCAACTAGAAACTCTTGGAGCCCAAAGGGCTGGTCTTGAAGACATGCTTAAAGAGATGAAAAGAAAGGATGATATATTACCAAAGTTGATGACATCCACTGGCTCTCATGAGGATCTCTTTAAGAAGGAAATAGCAAAATATGATCATATTTGTGAAGAAATAGCTCAAAATATTGAGGCACAGGAGCAACTGTTGATGCAGATCCAGGCTCAGAATGATGAATTCTCGGCTCTCTTCAATCTTGAAGACTACAAAGCTTCACGTGAAAAATGCTATAAGCAGATTGAAGCTGCCATAGCCAAGTTTCGAGAGATAAAAGACAACATTAATGAAGGGTTAAAATTCTATGTTACTCTGCAGGATGCGATCACAAATGTAAAGCAGCAGAGTAATGACTTTGTAATGACAAGGAACATCCAGTGCAGAGAAATGATTGAAGATGTTCAAAGACAAGTGGCTGGTCTGAGTTTCCAAGATAAAAACTCAGGTGCTTTTAGTAGTAGCTACCCACCAGTTGGAAGCCAAAACCAAAGACCCAGTACACAACAAACAGATCCTCGTCCCCAAACACCTTATTATCAACCACCTGAGCAGCCTCCGGTTTCTTCCTACAGACATCCCCCTCCCTCATATGGTTCAGTAGCGCATCAGCCTCCACCTCCATACCACATTCCACCAACATCTGCCGCTCCATACCAACCCCATCAGGTTCATCAGCAGGCACCAGCAGAGTATGGCCAACCTGCATATCCTGGATGGCGTGGTCCATACTATAATGCGCCAGCTCAGCAACCTGGTTCTGTTCCCAGGCCTCCATATACCGTTCCATCTCCATACCCTCCACCTCATCAAGGTGGATACTATAAGCAGCAATAG 2604 0.4835 MAATPSSSAAGATNIMLAIFEKKTNSVDLYRPLRNYIAFNYSEREAQNLEDDLQTLKQQRADIERHSDPSLPSRRDLLQSYFRALCLVETRFPISPDPAHVNALTFVWFDAFKPKQKSSQQNIHLEKASVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGAFAYLRDNASMKASIGGSATVDISGECAGMLEKLMLAQAQECVFENSIAKGSTPGVCSKISRQVGLYYEEALAALNVAPLNTHFDKSWIAHVQLKSALFYAEACFRYGLELHEKEEIAEEIARLRSAINVLTEAKKNSKGAAAQILDAIGKLEANINRNLERAVKENDRVYLMRVPSPSSLPPLAAFSMVKPMAMSEVLDASKEKMFASLVPDSSTKALSRYTEMVDDIIRMQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTSLKEDVEAVQISGGPAGLEAELQQLRDLRRVNQELLVQTEELLQKEAREDSQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDGRIERSVRENSAFMSILDARPIESALPTLARPIMSLDQNEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSHEDLFKKEIAKYDHICEEIAQNIEAQEQLLMQIQAQNDEFSALFNLEDYKASREKCYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRQVAGLSFQDKNSGAFSSSYPPVGSQNQRPSTQQTDPRPQTPYYQPPEQPPVSSYRHPPPSYGSVAHQPPPPYHIPPTSAAPYQPHQVHQQAPAEYGQPAYPGWRGPYYNAPAQQPGSVPRPPYTVPSPYPPPHQGGYYKQQ 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03581 867 MobiDBLite consensus disorder prediction 739 764 - -
Arst9g03581 867 Gene3D alix/aip1 like domains 12 376 IPR038499 -
Arst9g03581 867 Gene3D alix/aip1 like domains 423 704 - -
Arst9g03581 867 MobiDBLite consensus disorder prediction 739 867 - -
Arst9g03581 867 Coils Coil 627 654 - -
Arst9g03581 867 Pfam ALIX V-shaped domain binding to HIV 431 715 IPR025304 GO:0005515
Arst9g03581 867 SMART BRO1_2 15 399 IPR004328 -
Arst9g03581 867 CDD BRO1_Alix_like_1 16 371 - -
Arst9g03581 867 Coils Coil 279 299 - -
Arst9g03581 867 CDD V_Alix_like_1 377 713 - -
Arst9g03581 867 MobiDBLite consensus disorder prediction 841 859 - -
Arst9g03581 867 Coils Coil 39 66 - -
Arst9g03581 867 Gene3D alix/aip1 in complex with the ypdl late domain 377 655 - -
Arst9g03581 867 ProSiteProfiles BRO1 domain profile. 14 409 IPR004328 -
Arst9g03581 867 Coils Coil 578 598 - -
Arst9g03581 867 PANTHER PCD6 INTERACTING PROTEIN-RELATED 15 864 - -
Arst9g03581 867 MobiDBLite consensus disorder prediction 765 804 - -
Arst9g03581 867 Coils Coil 451 478 - -
Arst9g03581 867 Pfam BRO1-like domain 16 394 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03581 Arst-Chr9 112158571 112162972 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03581 9 112158571 112162972 Arst9g03581 9 112158571 112162972 ECH