Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03541 ATGGCAATCCAACATCACAATGACCAACTAGAACAACAACATCACCACCAACACGCTGTCCTCGATGCCCTTTACTGCGACGAAGGAAAGTGGGAAGAAGAGTTCTCAGGAGAGAGTGATGTCACAACAAACCACGACCATGAAGAAGATGATGATGGTGTCAACTTCAACTTGAACTTCCATTCCCTTGACCCTCTGCTCTTGTTGGAGCAGGACATGTTCTGGGAAGACGAAGAGCTCAACACTCTCTTCTCCAAAGAGAAGCTTGACCACGAAGCCTATTATAACAATGGCGATGATGTCATGAAAGCATTGGATCCTTCTTCTTCTTCTTCTGTGTGTATGGCTCGCCGTGAAGCAGTTGAATGGATGCTTAAGGTGAATGCTCATTACGGGTTCTCAGCTCTGACGGCAACACTTGCCGTTACTTATCTGGATAGATTCCTCTTGAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAACTTGCCTCTGTCACTTGCATCTCTTTGGCTGCTAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTGGACCTTCAAGTTGAAGATGCAAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTTCTGATTCTGTCCACCTTGAATTGGAAGATGCACCCTGTGACCCCACTCTCATTTCTAGATCACATTATAAGGAGGTTGGGACTCAAAACACATCTTCACTGGCAGTTCCTCAAGCGTTGTGAGAATCTTCTTCTGTCTTTGCTATTGGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTATTGGCCACTGCAACAATGCTGAATGTAATAGGCCAGATTCATCACAGCACTGAGGGAGTGGAATACAAAAACCAGCTTCTTAGTGTTATCAACATGAACAAGGAGAAGGTAGATGAATGTTATAAAGTCATAGTGGAGGTGACAAATAATAATAATAATGGTGGGAGGGGGAAGAAGAGAAAGTATGAGGAAATCCCTGGTAGCCCAAGTGGCGTAATTGATGCAGTGTTCAGCTCTGATGATGGTTCCAACGATTCGTGGGAAGTGGTGGTGGGGTCATCACCATCACAAGAGGAGGCTCAGCCTCAGCCTCTCTTGAAGAACAAGAAACAACAATTGAAATTGTCATCACTTAACAGGGTCATTGTCGGAATTGTTGGCACCACCCCATAA 1191 0.4442 MAIQHHNDQLEQQHHHQHAVLDALYCDEGKWEEEFSGESDVTTNHDHEEDDDGVNFNLNFHSLDPLLLLEQDMFWEDEELNTLFSKEKLDHEAYYNNGDDVMKALDPSSSSSVCMARREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLASVTCISLAAKVEETQVPLLLDLQVEDAKYVFEAKTIQRMELLILSTLNWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCENLLLSLLLDSRFVGCLPSVLATATMLNVIGQIHHSTEGVEYKNQLLSVINMNKEKVDECYKVIVEVTNNNNNGGRGKKRKYEEIPGSPSGVIDAVFSSDDGSNDSWEVVVGSSPSQEEAQPQPLLKNKKQQLKLSSLNRVIVGIVGTTP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03541 396 ProSitePatterns Cyclins signature. 117 148 IPR006671 -
Arst9g03541 396 Pfam Cyclin, C-terminal domain 219 328 IPR004367 -
Arst9g03541 396 Gene3D - 218 308 - -
Arst9g03541 396 SMART cyclin_7 122 210 IPR013763 -
Arst9g03541 396 SUPERFAMILY Cyclin-like 201 315 IPR036915 -
Arst9g03541 396 Gene3D - 115 217 - -
Arst9g03541 396 Pfam Cyclin, N-terminal domain 115 216 IPR006671 -
Arst9g03541 396 SUPERFAMILY Cyclin-like 102 217 IPR036915 -
Arst9g03541 396 FunFam CYCLIN D32 218 308 - -
Arst9g03541 396 CDD CYCLIN_AtCycD-like_rpt1 116 214 - -
Arst9g03541 396 PANTHER CYCLINS 82 313 IPR039361 -
Arst9g03541 396 SMART Cyclin_C_2 219 347 IPR004367 -
Arst9g03541 396 FunFam D3-type cyclin 110 217 - -
Arst9g03541 396 CDD CYCLIN_AtCycD-like_rpt2 219 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03541 Arst-Chr9 111894700 111896599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03541 1 313 Core Cell Cycle Gene Families AT4G34160 54.313 7.35e-107 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03541 9 111894700 111896599 Arst9g03541 9 111894700 111896599 ECH
Arst8g01353 8 18341402 18342686 Arst9g03541 9 111894700 111896599 ECH
Arst6g04066 6 108849227 108851924 Arst9g03541 9 111894700 111896599 ECH
Arst5g00815 5 7219276 7221162 Arst9g03541 9 111894700 111896599 PCT