Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02513 ATGGATGTGAAGGAAACTGGGGAGTTGGTGTCTTTGGACCCAGAGATGTTGCAGCTTCAGGAGGTTTCTTCTTTTGCACTGAAATCGAATCCTGGTGTTGCTGAGGAGCTATTCTCACAGTGGCTTTCGCTTCCTGATACTTGCCGCCTGGTCAAGTCATTGATAGATGATGCAAAGGCAGGAGCTTTGTCATGTGCACTTGAGAACTCACCAACCGCAAATGCTCTGGCAGGCAATTCAGTACCTTCGTTGTTTCCAGCTGGTACGACACCGCCGCTTTCACCACGAAGTTCAGCTGGTTCCCCACGTACTATGAAACAGAGAACTAGTCCTTCTTCATTAAGTTCTCCACTCAAAGTAGTCAGCGAGCCAGTACGGGAGATCATTCCACAGTTCTACTTCAAAAATGGTCGTCCTCCTCCGGATGACATGAAAGAGCATTTCCTATTTCAAATTGACAATCGATTTGTTGGTCATGTGGATGGTCTGCAGTTACATGAATTTAAGTCTATTACGAAAGAGATTTGCAAACTTCCGTCATTCTTCTCTGCTGCTCTCTTCAGAAAGATTGATGTCAATTATGCTGGAGCAGTAACAAGGGAACAATTTATTGACTATTGGGTTCGAGGCAATATGTTGGCTATGGATTTAGCTACACAAATATATACCATACTGAAGCAACCTTACCGGACATACCTAGTGCAGGATGATTTCAAACCTGTCTTGAGGGAGTTATTGTCCACTCATCCTGGGTTGGAGTTTTTGCAAAGCACACCTGAATTTCAGGAAAGATATGCTGAGACTGTGATACATAGAATATTTTACTACATGAATAGATCGGGCAATGGCCGACTTACACTACGGGAGTTGAAACGTGGGAACCTCATTGATGCCATGCTGCATGTTGATGAGGAAGAGGATATAAACAAAGTTCTGAGGTACTTCTCATATGAGCATTTTTATGTCATTTACTGCAAATTTTGGGAGCTCGACACAGATCATGACTTTTTCATTGATAGAGAGAACCTTATTAAATATGGGAACCATTCTCTTACATATCGGATTGTTGATAGAATATTTTCTCAGGTTCCACGGAAATTTACCAGCAAAGTTGAAGGGAAGATGAACTATGAAGATTTTGTCTATTTCATACTTGCAGAGGAAGATAAGTCGTCTGAACCTAGTCTAGAATACTGGTTCAGATGCATTGATTTGGATGGGAATGGAGTGCTGACACCAAACGAAATGCTGTTCTTTTATGAGGAGCAGTTGCATCGGATGGAGTGCATGGCCCAAGAGCCAGTGCTTTTTGAAGATATATTATGTCAGATTGTTGATATGATTGGACCAGAGCAGAATGAGGGATTTATTACATTGCGAGATGTTAAAGGCAGCAAACTTTCTGGCAACGTTTTCAATATTCTTTTCAATCTGAACAAATTCATTGCTTTTGAGACCCGTGATCCGTTTCTTATACGTCAGGAGCGTGAGGATCCAAGTATGACAGAGTGGGATCGTTTTGCGCATAGAGAATATATTAGGCTTTCTATGGAAGAAGACGGCGAAGATATGTCGAATGCCAGTGGGGATGTGTGGGAAGAATCTCTAGAGGCTCCATTCTGA 1623 0.4221 MDVKETGELVSLDPEMLQLQEVSSFALKSNPGVAEELFSQWLSLPDTCRLVKSLIDDAKAGALSCALENSPTANALAGNSVPSLFPAGTTPPLSPRSSAGSPRTMKQRTSPSSLSSPLKVVSEPVREIIPQFYFKNGRPPPDDMKEHFLFQIDNRFVGHVDGLQLHEFKSITKEICKLPSFFSAALFRKIDVNYAGAVTREQFIDYWVRGNMLAMDLATQIYTILKQPYRTYLVQDDFKPVLRELLSTHPGLEFLQSTPEFQERYAETVIHRIFYYMNRSGNGRLTLRELKRGNLIDAMLHVDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIKYGNHSLTYRIVDRIFSQVPRKFTSKVEGKMNYEDFVYFILAEEDKSSEPSLEYWFRCIDLDGNGVLTPNEMLFFYEEQLHRMECMAQEPVLFEDILCQIVDMIGPEQNEGFITLRDVKGSKLSGNVFNILFNLNKFIAFETRDPFLIRQEREDPSMTEWDRFAHREYIRLSMEEDGEDMSNASGDVWEESLEAPF 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02513 540 Pfam EF-hand domain 216 305 IPR041534 -
Arst9g02513 540 FunFam Serine/threonine protein phosphatase 2A regulatory subunit B''alpha 125 226 - -
Arst9g02513 540 Pfam EF-hand domain pair 320 420 IPR002048 GO:0005509
Arst9g02513 540 Gene3D - 315 487 - -
Arst9g02513 540 MobiDBLite consensus disorder prediction 86 117 - -
Arst9g02513 540 Gene3D - 125 226 - -
Arst9g02513 540 SUPERFAMILY EF-hand 304 460 IPR011992 -
Arst9g02513 540 PANTHER PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED 17 526 - -
Arst9g02513 540 MobiDBLite consensus disorder prediction 520 540 - -
Arst9g02513 540 Gene3D - 227 314 - -
Arst9g02513 540 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Arst9g02513 540 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Arst9g02513 540 FunFam Phosphoprotein phosphatase 2A regulatory subunit 207 318 - -
Arst9g02513 540 SUPERFAMILY EF-hand 163 293 IPR011992 -
Arst9g02513 540 CDD PPP2R3A_B-like 207 481 - -
Arst9g02513 540 FunFam serine/threonine protein phosphatase 2A regulatory subunit B''beta-like 315 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02513 Arst-Chr9 92237191 92244418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02513 7 540 EF-hand Containing Proteins AT5G28850 73.832 0.0 830
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g02513 9 92237191 92244418 Arst9g02513 9 92237191 92244418 ECH