Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02229 ATGGACACAGCTCAGTGGCCACAGGAGATTGTGGTGAAGCCAATAGAAGAGATAGTTGTGGGAACAAACACATCATCATGTCATCAATCAAAACCACCATCTTCTAATAATCTTGCATCAGAGAATAATAACAACAACAATACCATCAAGAAACCAAGGCCACAGAAAGAGCAAGCCCTAAACTGTCCAAGGTGCCATTCAACAAACACAAAGTTCTGTTACTACAACAACTACAGCCTTACACAACCAAGGTACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGTGGGTCCCTTAGGAACATCCCTGTTGGTGGTGGATCCAGAAAGAACAAGAGATCTTCTACTTCAATATCATCATCACCGTCACCGCCTTCACCCAACAAGAACATTAAGCTTATTGGTAAGGTAGTCCATCAAGGCCAAGATCTGAACTTGGCTTTTCCGTCTGATTTGGTTGTTCATCAACAAAACAATAACAACAACAATAATACTCTTTCTTCTTCTTCTTCTTCTTCAACTATTACTAGTACTGTTACTACTACTACTACTACTACACCACCCTCTTCTACTACTCAATTCTCAGCAATGGAGCTTCTTACTGGGATCACTTCAGCAAATTCAAGAGGGGGTTTGGGTTTGAACTCTTTCTTGCCTCATCATCCACCTGATCCAAACACAGTGCTGTACAATAATAGTACTTTTGCTCTTCAGGATTTCAATAAGACAGCAGGATTGAATTTCTCTTTGGATGGGATTGGGATTGGGATTGTAGGGAGTGGATTTGCAGGCCTTCATCATCATCAACAAGATCAGACAAGTGGTGGTGGGAATAATAATGGGAGACTTTTGTTTCCATTTGAGGATTTGAATCAGGTTTCTAACGCCGACGCAATTGATCATCAGAGTAATAGCAAGGTCCATCAACAAGGGGATTCAAGTGGATATTGGAGTGGGATGTTAGGTGGAGGATCATGGTAA 984 0.4146 MDTAQWPQEIVVKPIEEIVVGTNTSSCHQSKPPSSNNLASENNNNNNTIKKPRPQKEQALNCPRCHSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSTSISSSPSPPSPNKNIKLIGKVVHQGQDLNLAFPSDLVVHQQNNNNNNNTLSSSSSSSTITSTVTTTTTTTPPSSTTQFSAMELLTGITSANSRGGLGLNSFLPHHPPDPNTVLYNNSTFALQDFNKTAGLNFSLDGIGIGIVGSGFAGLHHHQQDQTSGGGNNNGRLLFPFEDLNQVSNADAIDHQSNSKVHQQGDSSGYWSGMLGGGSW 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02229 327 MobiDBLite consensus disorder prediction 23 54 - -
Arst9g02229 327 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Arst9g02229 327 MobiDBLite consensus disorder prediction 101 132 - -
Arst9g02229 327 MobiDBLite consensus disorder prediction 109 129 - -
Arst9g02229 327 MobiDBLite consensus disorder prediction 23 58 - -
Arst9g02229 327 MobiDBLite consensus disorder prediction 301 327 - -
Arst9g02229 327 MobiDBLite consensus disorder prediction 301 317 - -
Arst9g02229 327 MobiDBLite consensus disorder prediction 156 193 - -
Arst9g02229 327 Pfam Dof domain, zinc finger 58 114 IPR003851 GO:0003677|GO:0006355
Arst9g02229 327 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 232 IPR045174 GO:0003700|GO:0006355
Arst9g02229 327 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02229 Arst-Chr9 75924753 75926860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02229 1 327 C2C2-Dof Transcription Factor Family AT4G24060 40.000 9.08e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst9g02229 zf-Dof 4.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02229 - - adu:107465965 566.614