Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00597 ATGCAAGATCCAACAACAGTATTCCAAATCCAACAAGCCTTGTTGAAACAACCACACTTCCCAGAACAAGAACAACAACTAAAGTGTCCAAGGTGTGAATCCACAAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCTCAGCCACGCCATTACTGCAAGAATTGCAGAAGGTATTGGACCAAAGGTGGCGCCTTGAGGAACATACCCGTTGGTGGTGGAACCAGAAAGACCCACAAACGTTCTTCTTCATCTTCTTCATCTTCCACTTCAAATTCATCCATCAAACGCCCTTCATCATCATCATCATCACAACAAGCCAATTCTATTACTACTAATAGTAATAATAGCGTTATTTGTTCCGGGTCTTATTCGACCCGGACTTGCACCGACCCGGTTGGTCAAGATCAGAGGGTGTTGAACATTGGTGGTAGCTTTAGTTCACTATTGGGAACAGATGGACCTTTTGGGGGGATTTTAGAGGGTGTAAATTCAAATGGGTCAGAGCTGAAAATTGGTGAATTTGGTGGTGGGATTGGGAATGTGGGTTCTGGATTGGTCGCGAATCCGAATTCAGGTCGAAACCCGGGTTTGGATATTCAGAATAATGGTGATTCAAGCTATTGGAATAATGGTGGTGGTCATGGTTGGTCTGATCTTGCAATATACACACCTGGGTCAAGCTTTCAGTAG 696 0.4382 MQDPTTVFQIQQALLKQPHFPEQEQQLKCPRCESTNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGALRNIPVGGGTRKTHKRSSSSSSSSTSNSSIKRPSSSSSSQQANSITTNSNNSVICSGSYSTRTCTDPVGQDQRVLNIGGSFSSLLGTDGPFGGILEGVNSNGSELKIGEFGGGIGNVGSGLVANPNSGRNPGLDIQNNGDSSYWNNGGGHGWSDLAIYTPGSSFQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00597 231 ProSiteProfiles Zinc finger Dof-type profile. 27 81 IPR003851 GO:0003677|GO:0006355
Arst9g00597 231 Pfam Dof domain, zinc finger 25 81 IPR003851 GO:0003677|GO:0006355
Arst9g00597 231 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 126 IPR045174 GO:0003700|GO:0006355
Arst9g00597 231 MobiDBLite consensus disorder prediction 78 114 - -
Arst9g00597 231 ProSitePatterns Zinc finger Dof-type signature. 29 65 IPR003851 GO:0003677|GO:0006355
Arst9g00597 231 MobiDBLite consensus disorder prediction 68 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00597 Arst-Chr9 4964965 4966760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00597 1 161 C2C2-Dof Transcription Factor Family AT1G51700 50.581 3.78e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst9g00597 zf-Dof 1.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00597 - - aip:107619380 316.235