Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03776 ATGGAAGGGATAGGTCCCAACAACAATTCATGCACAACAAGGCCTCATAATGAAGGTGGTGGTGGAAATAACAACAACAATTTAGAGAAGAAAGCAAGACCACAAGAGCAATTGAATTGTCCAAGGTGCAATTCAACAAACACAAAGTTTTGCTACTACAACAACTATAGCCTCACACAACCAAGGTATTTTTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGGTCCCTCAGGAATGTTCCTGTTGGTGGAGGTTCAAGGAAGAACAAGATCAAGATCAATACCAATAACAACTCTTCGTCATCGTCGTCAACAACATCAACACCTTCATCAAATTCAAAGGTTCTTGTTCATCAAGACCTACTAAACCCTAATAATAATAGGGTTATTCAAGGACAAGATCTTAATCTTGCTTTCCCATCTATGGATCATCACAACAATTATCATCATGGTTTGTTACCATTTATTGATATGGCTAATAATAATAATAGTAGTAATAATAATAATAATAATAGTAATGGTGATGCACCAAGTTCTCTTTCAGCTTTGGAGCTTTTAAGGTCAAGCATGGCTTCTAGGGGTTTGAGTAATCCATATTATGCTTCTTCTAATTCTTCATTGGTACCATCAAATTCATCAAGTGTAATTTACCCTACTTCTGGATTAGGGTTTCCAACCATGCAAGAAGTAGTTAATAATAATAAGCAAAATAGTGGTAACCTTGGATTTTCATCTTCTTCATCAATTATGGATCATCAACATCATGAAGAGAATATTGTTAATAATAGTGATGGTGGAGGAAGAGTTCTTTTCCCTTTTGGAGAGGTGATGAAGAGTGCTGAAGAAAACAACAACAAAGAACAAGGGAATAATTCATCAAGCACTGCCAATGGTGGATATTGGAATGGAATGATGGGTCAAGGGTCATGGTGA 936 0.3665 MEGIGPNNNSCTTRPHNEGGGGNNNNNLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKIKINTNNNSSSSSSTTSTPSSNSKVLVHQDLLNPNNNRVIQGQDLNLAFPSMDHHNNYHHGLLPFIDMANNNNSSNNNNNNSNGDAPSSLSALELLRSSMASRGLSNPYYASSNSSLVPSNSSSVIYPTSGLGFPTMQEVVNNNKQNSGNLGFSSSSSIMDHQHHEENIVNNSDGGGRVLFPFGEVMKSAEENNNKEQGNNSSSTANGGYWNGMMGQGSW 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03776 311 MobiDBLite consensus disorder prediction 90 114 - -
Arst8g03776 311 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Arst8g03776 311 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 227 IPR045174 GO:0003700|GO:0006355
Arst8g03776 311 MobiDBLite consensus disorder prediction 79 114 - -
Arst8g03776 311 MobiDBLite consensus disorder prediction 284 303 - -
Arst8g03776 311 MobiDBLite consensus disorder prediction 1 39 - -
Arst8g03776 311 Pfam Dof domain, zinc finger 36 91 IPR003851 GO:0003677|GO:0006355
Arst8g03776 311 MobiDBLite consensus disorder prediction 283 303 - -
Arst8g03776 311 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03776 Arst-Chr8 48186120 48188281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03776 30 311 C2C2-Dof Transcription Factor Family AT3G61850 45.515 2.48e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst8g03776 zf-Dof 6.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03776 - - aip:107623806 525.013