Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02396 ATGGGAATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGTGGGCACATTGTTCGATCCACCGGCCGGAAAGATCGACACAGCAAGGTTTACACGGCGAAAGGGCCGCGTGACCGTCGAGTTAGGCTCTCGGCACACACTGCAATCCAATTCTATGATGTCCAAGACAGGCTTGGCTATGACAGGCCAAGCAAGGCAGTGGACTGGCTTATCAAGAAGGCCAAAGCAGCCATCGACAAACTCGCCGAGCTCCCTCCTTGGGAGCCTACTCCTCCTCCTCCCACTACCAATGAGGTGGAGGAGGAGCAGAATGGAGGATCAACTGACATGGCAATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTTCAAAGGCAACTTGGTGAAGACCCTGAAAACCAACACCACCACTCAGCATTCATTCCTTCACCTATTGACACTGATGGTGGCATAGCATTTTTCCCAACAACGTCTGCTGCTTCCTCCATCAATTTCCAGAGCTACCCTCCTGAGATAATCTCAAGGACCAACAACTCCTCAGAGGATCTTGGACTTTCCCTTCATTCTTTCCAAGATTCTGGCCTAATTCATCATCATGGACAGTCACAACAAGGAGGTGGTGCAGATCATCAAAACCCTTCTTCAAATGACCAAACTCTCTTTGCTAACTACCAGAGAATGGTGGCCTGGAACAGTGATGCCGGAGGCACGCAAGCCGACATGAACCGTTCCGGTTTCATGGTGAATTCACCTGGTTTTTCTTCTGCTTTTTCTCATCATCAACAAAGGGGTACCCTTCAGTCCAGTTTCTCACCATCACTTCGCCCTTGGAGTGAGATTCCTCAAATGGCTTCTTCTAACGAGCATCACCACAACCACAAGTCTCAGCCAATCCAGCAGCAACACCAAGCTTCAATAGGTGAAGATGAGAGCCATGGTGTTGGTTCTGACAGGCCTTCATCTTCTGCTTCTCCTAATTCACATCACTGA 999 0.4915 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDKLAELPPWEPTPPPPTTNEVEEEQNGGSTDMAIAEQSESSGYNFQLQRQLGEDPENQHHHSAFIPSPIDTDGGIAFFPTTSAASSINFQSYPPEIISRTNNSSEDLGLSLHSFQDSGLIHHHGQSQQGGGADHQNPSSNDQTLFANYQRMVAWNSDAGGTQADMNRSGFMVNSPGFSSAFSHHQQRGTLQSSFSPSLRPWSEIPQMASSNEHHHNHKSQPIQQQHQASIGEDESHGVGSDRPSSSASPNSHH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02396 332 MobiDBLite consensus disorder prediction 260 332 - -
Arst8g02396 332 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Arst8g02396 332 MobiDBLite consensus disorder prediction 260 288 - -
Arst8g02396 332 MobiDBLite consensus disorder prediction 1 30 - -
Arst8g02396 332 MobiDBLite consensus disorder prediction 199 220 - -
Arst8g02396 332 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 304 IPR005333 GO:0003700
Arst8g02396 332 MobiDBLite consensus disorder prediction 85 107 - -
Arst8g02396 332 Pfam TCP family transcription factor 23 124 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02396 Arst-Chr8 33140012 33142727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02396 8 298 TCP Transcription Factor Family AT3G15030 43.529 2.17e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst8g02396 TCP 2.2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02396 8 33140012 33142727 Arst8g02396 8 33140012 33142727 ECH
Arst3g02257 3 28525532 28527409 Arst8g02396 8 33140012 33142727 PCT