Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst8g01727 | ATGGTTTTCCCTTCAATCCCAGTGTATTTAGATCCTCCCAGTTGGCACCACCAGCAGCAGCAGGCAAATGGCAATGGCAATGAGAGTTCAACTCAGGTGGTTCCGAGATCGGGATCAGAGGGAGCACTCAAGTGTCCTCGGTGCGAATCAAGCAACACAAAGTTCTGCTACTTCAACAACTACAGCCTGTCTCAGCCGCGACACTTCTGCAAGACGTGTAGGCGTTACTGGACAAGAGGCGGTGCTCTTAGGAACGTTCCGGTTGGTGGTGGTTTCCGGAGAAACAAGAAGACCAAGAGGAGTAGCAGTAGCCGCCCTGGAGGAAACACTGAAAAGCAGTCAACATCAACATCATCACTTCCTTCCGGTTTTAACCCAGGTTTCATGGCTTCTCTTGAGAACATGACCCTCTATGGAGGAGGATTGCATCAGCATCAGCATCAGCAGCAGTTTCCTAATTTCTTGAGTGGTTTTGATCCAACTACCACTTCTTCTTCGTTCCCTTTCCTGTTTGGAGAATCTAGGGTTAAATTGGAATCTGGAAACGGAGGGCTATTAAGTAATAGTTTGTCAGAGAACTATTCATGGACTGATCTTGCAGCTGCATCTTCTTCCGCTGCTCATCATCTCTTGTGA | 636 | 0.4796 | MVFPSIPVYLDPPSWHHQQQQANGNGNESSTQVVPRSGSEGALKCPRCESSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKKTKRSSSSRPGGNTEKQSTSTSSLPSGFNPGFMASLENMTLYGGGLHQHQHQQQFPNFLSGFDPTTTSSSFPFLFGESRVKLESGNGGLLSNSLSENYSWTDLAAASSSAAHHLL | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst8g01727 | 211 | Pfam | Dof domain, zinc finger | 42 | 97 | IPR003851 | GO:0003677|GO:0006355 | |
Arst8g01727 | 211 | MobiDBLite | consensus disorder prediction | 87 | 123 | - | - | |
Arst8g01727 | 211 | ProSiteProfiles | Zinc finger Dof-type profile. | 43 | 97 | IPR003851 | GO:0003677|GO:0006355 | |
Arst8g01727 | 211 | MobiDBLite | consensus disorder prediction | 14 | 37 | - | - | |
Arst8g01727 | 211 | MobiDBLite | consensus disorder prediction | 13 | 44 | - | - | |
Arst8g01727 | 211 | MobiDBLite | consensus disorder prediction | 102 | 123 | - | - | |
Arst8g01727 | 211 | ProSitePatterns | Zinc finger Dof-type signature. | 45 | 81 | IPR003851 | GO:0003677|GO:0006355 | |
Arst8g01727 | 211 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 22 | 156 | IPR045174 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst8g01727 | Arst-Chr8 | 25738872 | 25740159 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst8g01727 | 40 | 99 | C2C2-Dof Transcription Factor Family | AT2G37590 | 90.000 | 2.06e-36 | 128 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Arst8g01727 | zf-Dof | 1.9e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst8g01727 | - | - | adu:107461669 | 366.696 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst8g01727 | 8 | 25738872 | 25740159 | Arst3g00342 | 3 | 2499484 | 2501096 | PCT |