Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01726 ATGGTTTTCCCTTCAATCCCAGTGTATTTAGATCCTCCCAGTTGGCACCACCAGCAGCAGGCAAATGGCAATGGCAATGAGAGTTCAACTCAGGTGGTTCCGAGATCGGGATCAGAGGGAGCACTCAAGTGTCCTCGGTGCGAATCAAGCAACACAAAGTTCTGCTACTTCAACAACTACAGCCTGTCTCAGCCGCGACACTTCTGCAAGACGTGTAGGCGTTACTGGACAAGAGGCGGTGCTCTTAGGAACGTTCCGGTTGGTGGTGGTTTCCGGAGAAACAAGAAGACCAAGAGGAGTAGCAGTAGCCGCCCTGGAGGAAACACTGAAAAGCAGTCAACATCAACATCATCACTTCCTTCCGGTTTTAACCCAGGTTTCATGGCTTCTCTTGAGAACATGACCCTCTATGGAGGAGGATTGCATCAGCATCAGCATCAGCAGCAGTTTCCTAATTTCTTGAGTGGTTTTGATCCAACTACCACTTCTTCTTCGTTCCCTTTCCTGTTTGGAGAATCTAGGGTTAAATTGGAATCTGGAAACGGAGGGCTATTAAGTAATAGTTTGTCAGAGAACTATTCATGGACTGATCTTGCAGCTGCATCTTCTTCCGCTGCTCATCATCTCTTGTGA 633 0.4787 MVFPSIPVYLDPPSWHHQQQANGNGNESSTQVVPRSGSEGALKCPRCESSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKKTKRSSSSRPGGNTEKQSTSTSSLPSGFNPGFMASLENMTLYGGGLHQHQHQQQFPNFLSGFDPTTTSSSFPFLFGESRVKLESGNGGLLSNSLSENYSWTDLAAASSSAAHHLL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01726 210 MobiDBLite consensus disorder prediction 101 122 - -
Arst8g01726 210 MobiDBLite consensus disorder prediction 13 43 - -
Arst8g01726 210 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Arst8g01726 210 MobiDBLite consensus disorder prediction 15 36 - -
Arst8g01726 210 Pfam Dof domain, zinc finger 41 96 IPR003851 GO:0003677|GO:0006355
Arst8g01726 210 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 155 IPR045174 GO:0003700|GO:0006355
Arst8g01726 210 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Arst8g01726 210 MobiDBLite consensus disorder prediction 86 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01726 Arst-Chr8 25738872 25740160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01726 39 98 C2C2-Dof Transcription Factor Family AT2G37590 90.000 2.20e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst8g01726 zf-Dof 1.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01726 - - adu:107461669 375.941