Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01353 ATGGCTCCCTACCATCTCCAAGACGCTCTATACTGCTCAGAGGAAGAGGATGAATTAGAACAAGATGAGGGTTCCGGGTTGGTAGAAGGGGACATGTTTTGGGATGATGAGGAGCTTGCGTGGATGCTGGCCAGGGAAGAACAACACACAACACACACCCCTCTCTGCTTCCAATTGGAGTCTGCTCGCAGAGAGGCGGTGGAGTGGATACTCAAAGTCAGCTCACATTACTCCTTCTCTCCTCTCACTTCTCTTCTTGCCGCCAACTACCTTCACAGGTTCCTCTTCACTTTCTCCTCCATTAACAATCTCAATAAGCCATGGATGACTCAGCTGGCTGCCGTCGCTTCTCTCTCACTCGCTGCCAAGCTTGAAGAGACTCATCTCCCCCACTTACTAGACCTCCAAGTGGAGGATTGCAGATACGTGTTCGAAGCCAAAACCATCAAAAGGATGGAGATTTTGGTGCTTTCAACTCTCCGATGGAAGATGAATCCCGTCACTCCTCTCTCTTTTCTCGACTATATCACACGAAGACTTGGATTATTCAACTCCAACGACTTCCTCACCAGATCCCAATCCCTTCTTCTATCTACCCTTCCAGATAGCAGGTTCATGAGTTACCTTCCTTCTGTGGTGGCAACTGCCACAATGATGCACGTGTTGAATGGCGTGGAGCAGCGAAACCAGGTGGTACGCATTCTCGGAACGAAGAAAGAGAAGGTGGATGAATGCTTGAAGCTGATATGGGAACAGGGGAACAAGAAACGCAAGTTTGGATGGGTTCCAGATAGTCCAAACGGCGTCATGGATGTGTCGTTTACCTCTGCCTCTGATGATAGCTCCAATGATTCATGGCCTCTACTACTTGCTAATAATAATAATAATAACAACAATGTTTCTTCCCTCTCATCCTCACCGGAACCTAAGAAGAATAGGACTCTACTAAACCCTCCCAACTCATCCCATTTCATTTAG 978 0.4765 MAPYHLQDALYCSEEEDELEQDEGSGLVEGDMFWDDEELAWMLAREEQHTTHTPLCFQLESARREAVEWILKVSSHYSFSPLTSLLAANYLHRFLFTFSSINNLNKPWMTQLAAVASLSLAAKLEETHLPHLLDLQVEDCRYVFEAKTIKRMEILVLSTLRWKMNPVTPLSFLDYITRRLGLFNSNDFLTRSQSLLLSTLPDSRFMSYLPSVVATATMMHVLNGVEQRNQVVRILGTKKEKVDECLKLIWEQGNKKRKFGWVPDSPNGVMDVSFTSASDDSSNDSWPLLLANNNNNNNNVSSLSSSPEPKKNRTLLNPPNSSHFI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01353 325 MobiDBLite consensus disorder prediction 285 325 - -
Arst8g01353 325 SUPERFAMILY Cyclin-like 33 165 IPR036915 -
Arst8g01353 325 SMART cyclin_7 171 251 IPR013763 -
Arst8g01353 325 SMART cyclin_7 68 158 IPR013763 -
Arst8g01353 325 Pfam Cyclin, C-terminal domain 167 253 IPR004367 -
Arst8g01353 325 Gene3D - 52 165 - -
Arst8g01353 325 Pfam Cyclin, N-terminal domain 48 165 IPR006671 -
Arst8g01353 325 SUPERFAMILY Cyclin-like 150 252 IPR036915 -
Arst8g01353 325 FunFam D6-type cyclin 49 165 - -
Arst8g01353 325 CDD CYCLIN_AtCycD-like_rpt2 167 249 - -
Arst8g01353 325 Gene3D - 42 247 - -
Arst8g01353 325 PANTHER CYCLINS 42 255 IPR039361 -
Arst8g01353 325 SMART Cyclin_C_2 167 278 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01353 Arst-Chr8 18341402 18342686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01353 2 314 Core Cell Cycle Gene Families AT5G67260 44.034 2.57e-76 238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01353 8 18341402 18342686 Arst5g00815 5 7219276 7221162 ECH
Arst8g01353 8 18341402 18342686 Arst1g01390 1 15613560 15615777 ECH
Arst8g01353 8 18341402 18342686 Arst9g03541 9 111894700 111896599 ECH
Arst8g01353 8 18341402 18342686 Arst8g01353 8 18341402 18342686 ECH
Arst6g04066 6 108849227 108851924 Arst8g01353 8 18341402 18342686 PCT