Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01352 ATGGGAGGTTGGGCAATAGCTGTGCATGGTGGCGCTGGCGTGGACCCAAATCTCCCACCTCAACGCCAGGAAGAGGCCAAGCAACTCCTTGCTCGTTGCCTCAACCTTGGCATCTCTTCTCTTCATTCCAATGCTTCCGCCATCGACGTCGTTGAACTTGTCGTGAGGGAGCTGGAAACGGATCCACTGTTCAACTCTGGGCGCGGATCTGCGCTGACAGAAAACGGTACAGTGGAAATGGAGGCAAGCATCATGGACGGTCCCAAGAGACGTTGCGGCGCCGTTTCTGGCCTCACAACCGTCAAGAACCCTATCTCTCTTGCTCGCCTTGTCATGGATAAGTCCCCCCATTCCTACCTTGCCTTCTCCGGCGCTGAAGATTTCGCCAGGCTCCAGGGTGTGGAGGTTGTGGAGAACGAATACTTCATTACCCCTGAGAATGTTGGGATGCTGAAGCTCGCAAAGGAAGCCAATACAATCCTGTTCGACTACAGGATTCCAACGAACGGTTACGACACGTGCGGCGCAGGAGTGGAGAGCCCAATGAAGATGAACGGGCTTCCGATAAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAAGGAAGGTAGATGTGCGGCTGCCACGTCGACAGGGGGGCTCATGAACAAGATGACTGGTAGGATCGGTGACTCACCGCTCATAGGAGCTGGAACTTACGCGTGTGAGTTGTGCGGTGTGTCCTGCACGGGTGAAGGGGAGGCTATCATACGCGGGACTCTGGCGCGTGAGGTTGCGGCCGTTATGGAATACAAGGGCCTGGGCCTTCAGGAAGCGGTGGACTTTGTGATCAAGAATAGGCTCGACGAAGGGTTCGCTGGGCTCATAGCGGTGTCTAATAAGGGTGAGGTGGCTTATGGGTTCAACTGCAATGGCATGTTTAGGGGCTGCGCCACTGAGGATGGCTTCATGGAAGTGGGAATCTGGGAATAG 981 0.5607 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLARCLNLGISSLHSNASAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFARLQGVEVVENEYFITPENVGMLKLAKEANTILFDYRIPTNGYDTCGAGVESPMKMNGLPISVYAPETVGCVVVDKEGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACELCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQEAVDFVIKNRLDEGFAGLIAVSNKGEVAYGFNCNGMFRGCATEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01352 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Arst8g01352 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
Arst8g01352 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Arst8g01352 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Arst8g01352 326 CDD Asparaginase_2 5 318 - -
Arst8g01352 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01352 Arst-Chr8 18309879 18311581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01352 6 286 Miscellaneous Gene Families AT4G00590 27.723 5.78e-19 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01352 8 18309879 18311581 Arst8g01352 8 18309879 18311581 ECH
Arst6g04065 6 108816684 108819056 Arst8g01352 8 18309879 18311581 PCT