Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01328 ATGGAGACACGCGCCGCCGCAAAGAGAAGAGCCACCGCCCCCACCCAACTTGAGATTCAGCACCTCAAGAAGCAGCGTGTTGTCTTGGCCGAACTCCCCAATTTACCCAACCTCATTCAATCCCCCATCAACAGGAAACCCCATTCCACCATTGAAGCAAAATCACTCAAGTTCCACGATCCCAGTCTTATCGACGCGCCTTATGTTTCCGACATACATAGCTATCTTCATTCAATGGAGATGGAGAAGAAGAGAAGGCCAATGGTTGATTACATTCAAAAAGTTCAGAAAGAAGTTACCGCTAACATGAGAGGTGTATTGGTGGATTGGTTGGTAGAGGTTGCAGACGAGTACAAACTTCTCTCAGAGACTCTTTTTCTCTCTGTTTCTTACATTGATAGATTTCTATCTATAAACCCTGTTTTTCGATCCAAGTTTCAGTTACTCGGTGTTTCCTCCATGCTCATTGCATCGAAGTATGAAGAAATCAACCCTCCCAATGTAGAGGAATTCTGCTACATCACTGAAGATACATACACGAAATCACAGGTTGTACGGATGGAAGCTGACATACTCAAATCCCTAAAGTTTGAAATGGGGAACCCTACTGTTAAGACCTTTCTATCTATGTATTCAGGAATTGCTTCTATAGATAAAAAAATTAAGAATTCTCAGGTTGAATTTTTGAGCTGCTATCTTGCTGAGCTAAGTCTTTTGGACTATGATTGTGTGAAATTCTTGCCTTCTATGGTAGCTGCTTCGGTTATATTTCTTGCCAGATTTATTATCTGGCCTGTGGTGCATCCTTGGACTTCATCCTTGTGCGAATGCTCCGGTTATACATCGCTTGAACTTAAAGAATGTGTTCTGATCTTACATGACTTGTATTTGTCGAGAAGGGCAGCATCTTTATCAGCTGTTCGGGACAAATACAAGCAGCACAAGTTCAAATGGGTTGCAAATCTGTCTTCCCCACCAAGTATACCAACTTCTTACTTTAAAGAAATGTGA 1011 0.4194 METRAAAKRRATAPTQLEIQHLKKQRVVLAELPNLPNLIQSPINRKPHSTIEAKSLKFHDPSLIDAPYVSDIHSYLHSMEMEKKRRPMVDYIQKVQKEVTANMRGVLVDWLVEVADEYKLLSETLFLSVSYIDRFLSINPVFRSKFQLLGVSSMLIASKYEEINPPNVEEFCYITEDTYTKSQVVRMEADILKSLKFEMGNPTVKTFLSMYSGIASIDKKIKNSQVEFLSCYLAELSLLDYDCVKFLPSMVAASVIFLARFIIWPVVHPWTSSLCECSGYTSLELKECVLILHDLYLSRRAASLSAVRDKYKQHKFKWVANLSSPPSIPTSYFKEM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01328 336 Pfam Cyclin, C-terminal domain 202 324 IPR004367 -
Arst8g01328 336 Gene3D - 71 321 - -
Arst8g01328 336 Pfam Cyclin, N-terminal domain 71 199 IPR006671 -
Arst8g01328 336 SMART Cyclin_C_2 202 325 IPR004367 -
Arst8g01328 336 Gene3D - 85 200 - -
Arst8g01328 336 SMART cyclin_7 206 294 IPR013763 -
Arst8g01328 336 SMART cyclin_7 109 193 IPR013763 -
Arst8g01328 336 PIRSF Cyclin_A_B_D_E 2 334 IPR046965 GO:0016538|GO:0044772
Arst8g01328 336 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Arst8g01328 336 FunFam G2/mitotic-specific cyclin 87 200 - -
Arst8g01328 336 SUPERFAMILY Cyclin-like 64 199 IPR036915 -
Arst8g01328 336 PANTHER CYCLINS 54 313 IPR039361 -
Arst8g01328 336 SUPERFAMILY Cyclin-like 202 327 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01328 Arst-Chr8 18016786 18019047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01328 3 336 Core Cell Cycle Gene Families AT5G43080 54.023 5.43e-130 373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04057 6 108730130 108733162 Arst8g01328 8 18016786 18019047 PCT