Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00420 ATGTCTGGTCATGGTGAACACCATAGCGTTCCCCTTTCGGTGCTGCTGAAGCGCGAATTGGTGAACGAGAAAATCGAGAAGCCGGAGATTGTGTACGGCCAAGCCAGCCAGAGCAAGAAAGGAGAGGATTTTATTCTGCTCAAGAACGAATGCCAGAGGGTCATGGGAGATGGCGTCTCCACATTTTCTGTTTTCGGGCTATTTGATGGTCACAATGGAACTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAACAACATTTTAAGTGCAATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCCAGGGCTTTGGTTGCAGGATTTGTGAAAACTGACAAAGATTTTCAACAGAAAGCAAAAACATCGGGAACAACTGTAACCTTTGTGATTCTTGAAGGATGGGTGGTAACAGTTGCATCAGTCGGTGATTCGCGTTGCGTACTTGAACCTGCTGAAGGTGGTATTCATTACTTGTCAGCGGATCATAGACTTGAAACCAATGCAGAAGAGAGGGTCCGCATAACCTGTAGCGGGGGTGAGGTTGGCCGGCTAAATACAGGTGGAGGAGCAGAGGTTGGCCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCGAGATCCATTGGTGATGCAGATGTTGGTGAATTTATTGTTCCTGTACCATATGTAAAGCAAGTGAAGCTTTCTAGTGCCGGAGGAAGGCTTGTTATCAGCAGTGATGGTGTCTGGGACTCTCTAACTCCAGAAGTGGCCTTGGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACAAATTGTGAATGAAGCTTTACAAGCAAAGGGTCTTAGAGATGACACAACCTGCATTGTTGTTGATATATTACCCCAAGAGCAGCCGCATACTTCTGTACGAACTCAAAAGAAACCGATGAAAGGAATTATGAAGATCTTCCGCAAAAAGTGCTCCGAATCATCATCTCATACCAACAAAGAATATGTAGAGCCAGATATTGTACGGGAGCTCTATGAGGAAGGTTCTGCTATGCTTTCAGAGAGGTTAGAGACAAAATATCCACTCTGCAACATGTTCAAGTTGTTTATCTGTGCTGTGTGTCAAGTAGAGATCAAACCAGGGGAGGGTATCTCAATACATGCAGGGAAGACCAACCCTGGAAAATTGCGTCCATGGGATGGACCTTTTCTTTGCTCAAGTTGCCAAGAGAAGAAGGAAGCCATGGAAGGGTTACGGAAATCAGGAAGACATCGCGGCAGTGACAGTGACGACTAA 1287 0.4592 MSGHGEHHSVPLSVLLKRELVNEKIEKPEIVYGQASQSKKGEDFILLKNECQRVMGDGVSTFSVFGLFDGHNGTAAAIYAKENLLNNILSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQQKAKTSGTTVTFVILEGWVVTVASVGDSRCVLEPAEGGIHYLSADHRLETNAEERVRITCSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDADVGEFIVPVPYVKQVKLSSAGGRLVISSDGVWDSLTPEVALDCCRGMSAEAAAPQIVNEALQAKGLRDDTTCIVVDILPQEQPHTSVRTQKKPMKGIMKIFRKKCSESSSHTNKEYVEPDIVRELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHAGKTNPGKLRPWDGPFLCSSCQEKKEAMEGLRKSGRHRGSDSDD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00420 428 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Arst8g00420 428 SMART PP2C_4 21 291 IPR001932 -
Arst8g00420 428 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Arst8g00420 428 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722|GO:0006470
Arst8g00420 428 Pfam Protein phosphatase 2C 42 283 IPR001932 -
Arst8g00420 428 CDD PP2Cc 39 293 IPR001932 -
Arst8g00420 428 Gene3D - 31 302 IPR036457 -
Arst8g00420 428 FunFam probable protein phosphatase 2C 12 32 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00420 Arst-Chr8 6173436 6177568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00420 1 427 PP2C-type Phosphatase Gene Family AT1G47380 77.103 0.0 700
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00420 8 6173436 6177568 Arst8g00420 8 6173436 6177568 ECH
Arst6g04134 6 109468580 109473736 Arst8g00420 8 6173436 6177568 PCT