Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00377 ATGAAAGCTACTACTCCTCCTCCTTACACAGCAATGGCAATGCAAATGCAAAGCTTTTCTTCATCCGCATTATTGGCGGAGCCAGACCTCTCCTTAAACATTAGCCCTCCTTTCCTTTCTGCCAAAGGAACATTCAAAGATATGTGCTCCTCAATCTCTGATTCAGGTAGTAGTGGAAGCGATGCAAGCCATGATAATAATAATAATAATAATAATTGCTTCTTTCACCACACCCACACTGTTCCACAACCGACATTGACATTAGGGTCTGGACCTGCATCAAACTTGAATCATCATCATCATTATCATCATCTCCATCAGTATCAAATGCAAGGGCTCTCAAGAAACTACTTCAATCATCATCCTCACCAACCTCAAATCCATTGCCGCTCCGATTTCAAACGAAATGGTGGCGGGAGAAGAAGCATGAGAGCTCCCAGAATGAGATGGACTACCACACTCCATGCTCATTTTGTTCATGCTGTTCAGCTTCTTGGCGGTCATGAAAGGGCAACTCCGAAGTCAGTGTTAGAGTTAATGAATGTTAAGGATCTAACTCTAGCTCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGTCCCAGGTAATGGTCACAAGGTAGATATGGGGTTCGAGCAGCAAAGGCAAGAGGTCGTTGTGGATCATCTACATGCTCAGAGAGGCCTTCTCCAACACCCACTGGTGCAACTGCAACAATCCCAAAGGTCATCATGTCAATCACGACTACTAGAGACAAATACAAATATTACTCGACAAAAACCCGATATCAGCTTCGTGTATTCTCGTCTCCAAGATGGCAATGAAATCATGAATAATCACGGAGGGTTGTCGAATTACTTGAAGATGAAGGAGAGGTCGGACTGTAACAATTTGTCGTCAGATTCAGAAGGCGTTATTGATCTGGAATTCACTCTTGGAAGGCCAACACACCATCAGGATGAATCATCAAGAGAGTTAACTCTTCTCAAGTGTTAA 1014 0.4329 MKATTPPPYTAMAMQMQSFSSSALLAEPDLSLNISPPFLSAKGTFKDMCSSISDSGSSGSDASHDNNNNNNNCFFHHTHTVPQPTLTLGSGPASNLNHHHHYHHLHQYQMQGLSRNYFNHHPHQPQIHCRSDFKRNGGGRRSMRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKVPGNGHKVDMGFEQQRQEVVVDHLHAQRGLLQHPLVQLQQSQRSSCQSRLLETNTNITRQKPDISFVYSRLQDGNEIMNNHGGLSNYLKMKERSDCNNLSSDSEGVIDLEFTLGRPTHHQDESSRELTLLKC 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00377 337 MobiDBLite consensus disorder prediction 124 143 - -
Arst8g00377 337 FunFam Myb family transcription factor 144 202 - -
Arst8g00377 337 Gene3D - 145 202 - -
Arst8g00377 337 MobiDBLite consensus disorder prediction 125 139 - -
Arst8g00377 337 NCBIfam myb-like DNA-binding domain, SHAQKYF class 146 199 IPR006447 GO:0003677
Arst8g00377 337 Pfam Myb-like DNA-binding domain 147 198 IPR001005 -
Arst8g00377 337 SUPERFAMILY Homeodomain-like 143 200 IPR009057 -
Arst8g00377 337 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 28 327 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00377 Arst-Chr8 5557976 5561469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00377 28 223 G2-like Transcription Factor Family AT5G42630 55.665 1.44e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst8g00377 Myb_DNA-binding 1.5e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00377 8 5557976 5561469 Arst8g00377 8 5557976 5561469 ECH
Arst6g04190 6 109926369 109932640 Arst8g00377 8 5557976 5561469 PCT