Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02715 ATGGCGAAACCGGGGCGAGGCCATCGCTCTCCGCCCTCGGGCTCCGGCTCCTCCTCCCGCTCCCGTTCCTCTTCCCCTTCAGATTCTCGCTCTTCCTCCCGCTCTCGCTCCCTCTCTCGATCCCGTTCTCCTTCTCGCTCCAGATCCTTCTCTTCCTCCTCCTCCTCCCCGTCTCGCTCCTCCCGAAGCCGAAGCCGAAGCCCTCCCCCTCAGCGCCGAAGAAGCTCCCCTGAAGCAGCCAGGCGAGGTCGATCTCCTCCTCCTCAGTCTAGAAGAGCTTCTCCTCCTCCAAGGTAAATCTTCTTCCTTTTTCCAAGTATACTGCTTTATATGATTCTACTTCATGTGTGAAAGATTTCTAAGAACTCATCATTTCACGGGCCTTTTTTCCATTTGAAAGAAATTTTCAGTAACTTTGGTGAGGTTGTAAGTGTGGAGTTGGCAATGGACCGAACTGTTAATCTTCCAAAAGGATATGGATATGTGCAGTTTAAGACAAGAGCAGATGCTGAACAAGCTTTATTGCACATGGATGGTGCCCAAATAGATGGGAATGTTGTTAAGGCAAGATTTACACTACCTCCTAGACAGAAAGTTTCTTCACCACCAAAAGCTGCTGCTGTTGCTCTGAAGAGAGATGGCCCTAGGACTGATAATGCTAGTGCAGATGTTGAAAAGGACGGGACAAAGCGGCCAAGAGAATCTCCTCGGAGAAAACCTCCTCCCTCGCCACGAAGAAGATCTCCTGTGCCTCGAAGAGTTGGATCTCCAAGACGACCAGATTCTCCAATTCGCCGTCGTGCAGATTCTCCAATTCGCCGTCGATTAGACTCTCCTCATCGTCGTGGAGACACACCTCCTAGGAGGAGGCCTATATCCCCTGGGAGAGGCCGTTCTCCATCTCCACCTAGGCGTCTTAGATCCCCTGCAAGGGTCTCGCCAAGAAGGTTGCGGGGAAGTCCAGGTCGTAGACGTTCCCCTCCTCCTCTAAGGCGCCGTTCACCGCCTAGACGAGCTCGTAGTCCTCCTAGAAGGTCTCCAATAAGTCGTAGGCGCAGTCGCTCTCCAATACGTAGACGCTCACGCTCAAGATCATTCTCACCTCGAAGAGGTCGACCACCTGTAAGACGTGGGAGGTCTTCATCCTACTCTGACTCGCCAAGTCCACGGAAGGTATCCCGGAGATCGAAGAGTCGCAGTCGCAGCCCAAGAAGGCCTTTGAGAGGAAGAGGCAGTAGCAACAGCAGCAGCAGCAGTTCACCACCCCCACCTCGCAAACCCTAG 1284 0.5327 MAKPGRGHRSPPSGSGSSSRSRSSSPSDSRSSSRSRSLSRSRSPSRSRSFSSSSSSPSRSSRSRSRSPPPQRRRSSPEAARRGRSPPPQSRRASPPPRXIFFLFPSILLYMILLHVXKISKNSSFHGPFFHLKEIFSNFGEVVSVELAMDRTVNLPKGYGYVQFKTRADAEQALLHMDGAQIDGNVVKARFTLPPRQKVSSPPKAAAVALKRDGPRTDNASADVEKDGTKRPRESPRRKPPPSPRRRSPVPRRVGSPRRPDSPIRRRADSPIRRRLDSPHRRGDTPPRRRPISPGRGRSPSPPRRLRSPARVSPRRLRGSPGRRRSPPPLRRRSPPRRARSPPRRSPISRRRSRSPIRRRSRSRSFSPRRGRPPVRRGRSSSYSDSPSPRKVSRRSKSRSRSPRRPLRGRGSSNSSSSSSPPPPRKP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02715 427 MobiDBLite consensus disorder prediction 309 376 - -
Arst7g02715 427 MobiDBLite consensus disorder prediction 216 241 - -
Arst7g02715 427 MobiDBLite consensus disorder prediction 1 96 - -
Arst7g02715 427 FunFam Serine/arginine-rich splicing factor SR45 3 201 - -
Arst7g02715 427 SUPERFAMILY RNA-binding domain, RBD 131 200 IPR035979 GO:0003676
Arst7g02715 427 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 279 395 - -
Arst7g02715 427 MobiDBLite consensus disorder prediction 11 65 - -
Arst7g02715 427 Gene3D - 10 202 IPR012677 -
Arst7g02715 427 SMART rrm1_1 113 190 IPR000504 GO:0003723
Arst7g02715 427 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 132 188 IPR000504 GO:0003723
Arst7g02715 427 CDD RRM_RNPS1 114 190 IPR034201 -
Arst7g02715 427 MobiDBLite consensus disorder prediction 258 291 - -
Arst7g02715 427 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 132 194 IPR000504 GO:0003723
Arst7g02715 427 MobiDBLite consensus disorder prediction 193 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02715 Arst-Chr7 69777977 69782962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02715 132 194 Eukaryotic Initiation Factors Gene Family AT3G11400 31.746 1.38e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02715 7 69777977 69782962 Arst7g02715 7 69777977 69782962 ECH