Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02212 ATGCAAGACCCAACAATATTTCAACCCATCAAACCCCAATTTCCTGAACAAGAACAACTTAAATGCCCACGTTGCGACTCAACAAACACCAAATTCTGCTACTACAACAACTACAATCTCTCACAGCCACGCCATTTTTGTAAGAATTGCAGAAGGTATTGGACCAAAGGAGGTGCTCTTAGGAACATCCCAGTTGGTGGTGGAAGCAGGAAGAACACAAAAAAATCATCCACCAACAACAACTCCTCCAAACGCCCTACATCATCATCTGCACCATCATCATCATCAGTATCCCCTTCACCATCCGTTTCCACTCCAGCACAGGCTGCTTCATCCGCTCCTGAATCCGACTCGGCCCAGGCCTACGCCGCCCAGCCTACTGTGGCTGATCAAGGCCCAGGCTTAAGCTTCAGTTCCCTATTGGCAACTAGCCATCTGGGGAGCCTATTGGAGGGTCTGAATTCAAATGGATCAAGTCTTAAAATGGTGCAAATGAATGAATTCGGAGTGAATGTGAATTCGACCGGTTCTGTTGAGCCGCCAGTGAGCTCGAATTCTAGTAGAAATCCAGGGTTGGATGTTCAGAGCAATGGCAATAATGCAGAGAGCTTTCTGAGTATGCATAATGGTGATTCAAGCTGTTGGAATAATGGTAGCAATGGATGGTCTAATCTTGCAATATTTACACCAGGATCAAGCTTTCAGTAG 708 0.4605 MQDPTIFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKKSSTNNNSSKRPTSSSAPSSSSVSPSPSVSTPAQAASSAPESDSAQAYAAQPTVADQGPGLSFSSLLATSHLGSLLEGLNSNGSSLKMVQMNEFGVNVNSTGSVEPPVSSNSSRNPGLDVQSNGNNAESFLSMHNGDSSCWNNGSNGWSNLAIFTPGSSFQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02212 235 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Arst7g02212 235 MobiDBLite consensus disorder prediction 69 126 - -
Arst7g02212 235 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 187 IPR045174 GO:0003700|GO:0006355
Arst7g02212 235 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Arst7g02212 235 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Arst7g02212 235 MobiDBLite consensus disorder prediction 61 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02212 Arst-Chr7 51454408 51456499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02212 11 150 C2C2-Dof Transcription Factor Family AT1G51700 55.634 3.10e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst7g02212 zf-Dof 2.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02212 - - gmx:100798927 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02212 7 51454408 51456499 Arst7g02212 7 51454408 51456499 ECH
Arst7g02212 7 51454408 51456499 Arst9g00531 9 4520731 4528330 PCT