Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01981 ATGCTCACAAACCCTTCTGCTGCTGTGCAAGCTTCCAAGGTAGCCCTTGTGCATAGTTGTGCTCATGCTCGCCGAAGATCTGCTCCCATTCCACTTAAGGAGAAAGGGCTGATCATAAGACCTGAGATTTGCTTGACTTATGATGTGCTATTAAGATCCCTTTGTCAAGCAGGCCTTCACAATTCAGCAACATTAATATATAATTGTATGAAATCTGATGGGAAATTGCCTGAGAGTAAGCTGTTAGGATTTTTGGTTTCTTCTTATGCACTGGCAAACAGATTTGATATGTCAAGGGAATTACTTGCTGAATCTCATTCCAATAAGGCACCTGTGAATGCTATTGTTTATAATAGCTTGTTGAATGTATTGGTAAATCAAAAGAAATTAGATGATGCTGTTTGTTTACTCATGGAGCTTATGAGATTGCAATGTCATCTAGAGACCTTCACTTTCAACATTGTAATGCGAGGTTTGTGCAGAGCTGGGGAAATCAATGAAGCTTTTAAGTTTCTCAATGATATGATTAGCTATGGTTGTCAACCTGATATAGTTACATATAACACTCTTATACATGGTTTATGTATAAATAACAAAGTCGATAAAGCACGCGATCTACTAAAAGATGTTTCTTCAAAAACTGATTTTGCCCCCAATGTTGTAGGTTATACAACAATAATATCTGGTTATTGCAAACTGGGTAAGATAGCAGAGGGAACTTCTCTTTTTGATGAAATGGTTGAATCTGGAATTAGGCCTAATACATTTACTTATAATGTGCTTATTCATGGCTTTGCTAAGATGGGTGACATGGCTTCTGCAGTAGCCATGCATGACAGTATGCTTTTTCACGGTTGTCCCCCTGATGTTGTTACCTTCACCTCGCTAATTGATGGATATTGCCGAGCTGGGCAGGTGAATCATGGCTTGGACCTGTGGCATGAAATGATTGCAAGAAATATTTCTCCGAATTTGTATACATTCTCTGTGCTTACTAATGCACTATGCAAGAGCAATAGGCTACAAGAAGCTCATGACATTTTGAGGCTATTGAAGCAAAGTGAAATTGTTCCACAGCCCTTTATCTATAATCCTGTTATTGATGGATATTGCAAATCTGGGAATGTTGATGAGGCTAATGCAATTGTACTAGAAATGGAGAAGTGCAAACCTGATAAGTTGACATATACCATTCTTATTGTTGGATATTGTATGAAGGGAAGAACACGTGAAGCAATTGGCATCTTTTACAAGATGTTGGAAGCTGGTTGTTCCCCAGATGACATTACTGTTAAAACTTTATGCTCCTGTCTTTTGAAGGCTGGAATGCCTCGTGAGGCTGCTCATATTAGGAAAATTCTATTTGAGAACCAAAGCTTGGGCTTGTCACTGGAAAGATCTTATAATGAAAATATAAATGCAGATATGCCAATTCTGGTTTATTGA 1446 0.3817 MLTNPSAAVQASKVALVHSCAHARRRSAPIPLKEKGLIIRPEICLTYDVLLRSLCQAGLHNSATLIYNCMKSDGKLPESKLLGFLVSSYALANRFDMSRELLAESHSNKAPVNAIVYNSLLNVLVNQKKLDDAVCLLMELMRLQCHLETFTFNIVMRGLCRAGEINEAFKFLNDMISYGCQPDIVTYNTLIHGLCINNKVDKARDLLKDVSSKTDFAPNVVGYTTIISGYCKLGKIAEGTSLFDEMVESGIRPNTFTYNVLIHGFAKMGDMASAVAMHDSMLFHGCPPDVVTFTSLIDGYCRAGQVNHGLDLWHEMIARNISPNLYTFSVLTNALCKSNRLQEAHDILRLLKQSEIVPQPFIYNPVIDGYCKSGNVDEANAIVLEMEKCKPDKLTYTILIVGYCMKGRTREAIGIFYKMLEAGCSPDDITVKTLCSCLLKAGMPREAAHIRKILFENQSLGLSLERSYNENINADMPILVY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01981 481 Gene3D Tetratricopeptide repeat domain 136 236 IPR011990 GO:0005515
Arst7g01981 481 Gene3D Tetratricopeptide repeat domain 237 358 IPR011990 GO:0005515
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 254 288 IPR002885 -
Arst7g01981 481 SUPERFAMILY TPR-like 111 427 IPR011990 GO:0005515
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 43 77 IPR002885 -
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 359 389 IPR002885 -
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 392 426 IPR002885 -
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 218 IPR002885 -
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 324 358 IPR002885 -
Arst7g01981 481 Pfam PPR repeat 46 74 IPR002885 -
Arst7g01981 481 Pfam PPR repeat 116 144 IPR002885 -
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 148 182 IPR002885 -
Arst7g01981 481 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 116 448 - -
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 219 253 IPR002885 -
Arst7g01981 481 Pfam PPR repeat family 288 337 IPR002885 -
Arst7g01981 481 Pfam PPR repeat family 149 195 IPR002885 -
Arst7g01981 481 Pfam PPR repeat family 218 267 IPR002885 -
Arst7g01981 481 Pfam PPR repeat family 361 404 IPR002885 -
Arst7g01981 481 Gene3D Tetratricopeptide repeat domain 383 456 IPR011990 GO:0005515
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 289 323 IPR002885 -
Arst7g01981 481 Gene3D Tetratricopeptide repeat domain 34 129 IPR011990 GO:0005515
Arst7g01981 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 113 147 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 150 184 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 326 358 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 291 324 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 185 220 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 362 389 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 256 290 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 223 255 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 115 143 IPR002885 -
Arst7g01981 481 NCBIfam pentatricopeptide repeat 395 427 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01981 41 467 Glycosyltransferase AT1G05670 26.914 4.50e-53 189