Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04279 ATGACCATCTCTGATAACCAAGGCAGCACCGCAGCTGCGGCTGTTCAGATTCAGCCGCCATCTCGGATGGCTCTACCGGATTTCCTGCAGAGTGTCAAGCTCAAGTATGTCAAACTAGGCTACCATTACTTGATCTCCAACCTCTTCACCTTTTGTTTTGTGCCTTTGATCTTTGTGACCTTAATCCATTTCTCTCAAACTGATATTGATGATCTTCACCATGTGTGGCTCCACCTCCAGTACAATATAATATCCATCCTCACTTGCTCTGCTTTCATTGTCTTTGGACTTACAGTTTTCATTCTCACTCGTCCTCGGCCTGTCTACCTTGTTGACTTTGCTTGTTATCGCCCAGCCGATCGCTTCAAGGCCCCCTTCTGTAGCTTTATGGAGCATTCTCGCCTCACCGGAGACTTTGATGAGTCCTCCCTAGAGTTCCAGCGCAAGATTCTCTTGCGCTCGGGACTTGGAGAGGAGACTTATGTCCCCGAAGCCATGCTTTACATACCTCCTAGATCTTCCATGGTTACGGCTAGAGCTGAGGCCGAAGAGGTTATGTTTGGTGCTTTGGATAGTTTGTTCCAAAACACCAATCTTAAGCCTAAGGCTATCGGCATTCTTGTGGTGAATTGCAGTTTGTTTAACCCCACGCCTTCCCTATCTGCCATGATTGTTAACAAGTATAAATTGAGGGGTAACATCAAGAGCTTCAATTTGGGGGGAATGGGGTGTAGTGCTGGAGTTATAGCTATTGATCTTGCCAAAGACTTGTTGCAGGTTCATAGGAATACTTACGCTGTTGTTGTTAGCACTGAGAACATTACTCAAAATTGGTACTTTGGGAATAAGAAATCTATGCTCATACCTAATTGCTTGTTTCGGGTCGGGGGTTCAGCCGTGCTGCTCTCCAACAAGTCTGCTGATCGGAGGAGAGCGAAGTACAGGCTTGTTCATGTAGTGAGGACCAATCGCGCTGCCGATGACAAGGCATTCCGGTGTGTCTATCAGGAACAGGATGATGCTGGGAAGACTGGTGTTTCCTTGTCTAAGGATTTGATGGCAATCGCAGGCAGTGCGCTTAAGACCAACATCACCACCCTTGGCCCCTTGGTGCTCCCAATCAGCGAACAGCTTCTATTTTTCGCCACATTGGTAATGAGGAAGTTGTTCAAGGCTGATGTGAAACCTTATATACCAGATTTCAAGCTTGCCTTTGATCATTTTTGCATACATGCCGGTGGCAGGGCGGTGATTGATGAGTTGGAGAAGAATCTCCAGCTTCTTCCTGTGCATGTTGAGGCTTCAAGGATGACACTTCACCGGTTTGGAAACACTTCGTCGAGCTCCATTTGGTATGAGCTGGCATATATAGAAGCCAAAGGGAGAATGAGAAGGGGAAATAGGCTTTGGCAAATTGCATTTGGAAGTGGGTTTAAGTGTAATAGTGCAGTTTGGGAAGCACTTCATAATGTGAAGTCTTCTCCTAATGGACCATGGGAAGATTGCATTGATAAGTATCCTGTGGAAGTACCCCTCATAGCTCAGCAACATATTAGTTAG 1560 0.4628 MTISDNQGSTAAAAVQIQPPSRMALPDFLQSVKLKYVKLGYHYLISNLFTFCFVPLIFVTLIHFSQTDIDDLHHVWLHLQYNIISILTCSAFIVFGLTVFILTRPRPVYLVDFACYRPADRFKAPFCSFMEHSRLTGDFDESSLEFQRKILLRSGLGEETYVPEAMLYIPPRSSMVTARAEAEEVMFGALDSLFQNTNLKPKAIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIKSFNLGGMGCSAGVIAIDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSADRRRAKYRLVHVVRTNRAADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGSALKTNITTLGPLVLPISEQLLFFATLVMRKLFKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGNRLWQIAFGSGFKCNSAVWEALHNVKSSPNGPWEDCIDKYPVEVPLIAQQHIS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04279 519 Gene3D - 143 487 IPR016039 GO:0016746
Arst6g04279 519 CDD CHS_like 90 485 - -
Arst6g04279 519 SUPERFAMILY Thiolase-like 316 487 IPR016039 GO:0016746
Arst6g04279 519 Pfam FAE1/Type III polyketide synthase-like protein 102 389 IPR013601 GO:0006633|GO:0016020|GO:0016747
Arst6g04279 519 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 405 486 IPR013747 -
Arst6g04279 519 FunFam 3-ketoacyl-CoA synthase 118 487 - -
Arst6g04279 519 PIRSF Very_long_ch_3-ktacl-CoA_syn 27 519 IPR012392 GO:0006633|GO:0016020|GO:0016747
Arst6g04279 519 PANTHER 3-KETOACYL-COA SYNTHASE 79 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
Arst6g04279 519 SUPERFAMILY Thiolase-like 94 312 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04279 Arst-Chr6 110774623 110776494 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04279 6 110774623 110776494 Arst6g04279 6 110774623 110776494 ECH