Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04256 ATGCCCTCTGCATTGTCTTCTTTCCCAGCGCGTGTGACGCTACTCGCTCTCTTCTCCGCCACAACCTTCTACTTCCTCTACAAGTCTCGCCGCTTGCGCCACCTCAAAACCCTCACTCTCTCTTCAAATCACACTACACGTGGCAAAATCCTATTCGTTTCACAAACCGGAACTTCCAAAAACCTAGCACAGCGCCTCCACAATCTCTTAGCCTCAAAGGGCGTCGTTTTCGACCTCGTAGATGCTCAGAGCTACGAGCCCGAAGACTTACCGAAAGAAACCCTAGTTCTCATCGTTGCTTCGACTTGGGAAGATGGGAATCCACCTTCTGGAGCACGGTTTTTTGCCACGTGGCTCGCGGAGAGCGTGAAGGATTTTAGGGTTGGGGCGTTGCTTCTGAAGGGTTGTAGGTTCGGGGTGTTTGGTGTGGGGAGTAGAGCTTATGGAGAGAGGTTCAATGCGGTGGCTAAGGGTTTTGTGAAGCAGATTAGGGATTTGGGTGGGAGTGAGGTTGTGCCTTTAGGGGAAGGTGATGTTGATGGTGGTGAATTGGATTTGGATTTTGAGAAGTGGTGTGAGAAGGTTGTTGGTTTTTTGAAAGGCAAGGTTTTGGAAAATGGGGTTAATGGTAATTTGGAGTGTGGGGTTTATGATTCTGAGGAGGAATCTGAAGGAGAGAGTGATTTGGAGGAAGAGGAAATTGTTGATCTTGAGGACATTGCTGGGAAGGTGCCACCAAGGAAGAAGACGGCAGCGGCAGCTGAGAGTAATGGTAATGGAAATGGAAAAGTGAATGGCCAAAGGGAAATGGTGACTCCAGTTATTAGAGCTAATTTAGAGAAGCAGGGGTATAAAATTATTGGTTCGCATAGCGGTGTTAAGATTTGTAGATGGACCAAGTCACAGCTTCGAGGACGGGGTGGTTGCTACAAGCATTCATTCTATGGTATTGAGAGCCATAGGTGCATGGAGGCAACCCCTAGCCTGGCCTGTGCAAATAAATGTGTTTTTTGTTGGAGACATCACACAAATCCAGTGGGAAAAAGTTGGCAATGGAAGATGGATGATCCAATAGAGATTGTAAATTCTGCAATAGAGATGCATTCAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTTACCCTGGAGCGACTAAACGAAGGTCTTACACCACGACATTGTGCATTATCTCTTGTTGGGGAACCTATTATGTATCCAGAGATAAATACACTTGTGGATGAACTGCACAAAAGGAGAATTTCCACTTTTCTGGTGACAAATGCACAGTTTCCAGATAAAATAAAGTCAATGAAGCCTCTCACCCAGTTATATGTCAGTGTAGATGCTGCAACAAAAGACTCCTTGAAGGCAATTGATAGGCCACTCTTTGGAGATTTCTGGGAACGATTCATTGATTCCTTGACAGCCCTGAAGGAAAAACATCAAAGAACTGTATACCGCTTGACATTGGTGAAAGGTTGGAACACTGAAGATGTTGATGCTTATTACAAGCTCTTTAGTATTGGAGAACCTGACTTTGTTGAAATCAAGGGAGTTACATATTGTGGCTCCTCTGCCACATCAAAATTGACGATGGAAAATGTGCCTTGGCATGCTGATGTGAAAGCTTTTTCAGAGGCCCTTGCTCTGAAAAGCCAAGGGGAGTATGAAGTTGCTTGTGAACATGCTCATTCATGTTGTGTTCTCTTAGCAAAGACTAAGAAGTTCAAGATTGATGGCAAGTGGTATACATGGATAGACTACGATAAATTTCATGACCTGGTAGGGTCTGTTTTCCTGGCTTTCCTGCATGGAGCAGAGGAAGGTGGTTTCGATCCTGAACAATCAAGATATAGGAAAGAGAGACGACATCATAAATCAAGTCGCAATCAATCAGGTTAG 1905 0.4467 MPSALSSFPARVTLLALFSATTFYFLYKSRRLRHLKTLTLSSNHTTRGKILFVSQTGTSKNLAQRLHNLLASKGVVFDLVDAQSYEPEDLPKETLVLIVASTWEDGNPPSGARFFATWLAESVKDFRVGALLLKGCRFGVFGVGSRAYGERFNAVAKGFVKQIRDLGGSEVVPLGEGDVDGGELDLDFEKWCEKVVGFLKGKVLENGVNGNLECGVYDSEEESEGESDLEEEEIVDLEDIAGKVPPRKKTAAAAESNGNGNGKVNGQREMVTPVIRANLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKMDDPIEIVNSAIEMHSNMIKQMKGVPGVTLERLNEGLTPRHCALSLVGEPIMYPEINTLVDELHKRRISTFLVTNAQFPDKIKSMKPLTQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTEDVDAYYKLFSIGEPDFVEIKGVTYCGSSATSKLTMENVPWHADVKAFSEALALKSQGEYEVACEHAHSCCVLLAKTKKFKIDGKWYTWIDYDKFHDLVGXSVFLAFLHGAEEGGFDPEQSRYRKERRHHKSSRNQSG 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04256 635 CDD Radical_SAM 327 507 - -
Arst6g04256 635 SUPERFAMILY Flavoproteins 49 199 IPR029039 -
Arst6g04256 635 MobiDBLite consensus disorder prediction 613 635 - -
Arst6g04256 635 SFLD tRNA wybutosine-synthesizing 266 577 IPR034556 GO:0008033|GO:0051539
Arst6g04256 635 SFLD tRNA wybutosine-synthesizing 266 577 IPR034556 GO:0008033|GO:0051539
Arst6g04256 635 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 41 629 IPR034556 GO:0008033|GO:0051539
Arst6g04256 635 FunFam S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 259 587 - -
Arst6g04256 635 Pfam Flavodoxin 50 191 IPR008254 GO:0010181
Arst6g04256 635 SUPERFAMILY Radical SAM enzymes 328 507 - -
Arst6g04256 635 ProSiteProfiles Flavodoxin-like domain profile. 48 196 IPR008254 GO:0010181
Arst6g04256 635 ProSiteProfiles Radical SAM core domain profile. 315 558 IPR007197 GO:0003824|GO:0051536
Arst6g04256 635 Gene3D Aldolase class I 256 585 IPR013785 -
Arst6g04256 635 Pfam Radical SAM superfamily 327 506 IPR007197 GO:0003824|GO:0051536
Arst6g04256 635 Pfam Wyosine base formation 510 573 IPR013917 -
Arst6g04256 635 Gene3D - 26 206 IPR029039 -
Arst6g04256 635 MobiDBLite consensus disorder prediction 247 266 - -
Arst6g04256 635 SFLD Radical SAM 266 577 IPR007197 GO:0003824|GO:0051536
Arst6g04256 635 SFLD Radical SAM 266 577 IPR007197 GO:0003824|GO:0051536
Arst6g04256 635 PRINTS Flavodoxin signature 160 179 IPR001094 GO:0010181
Arst6g04256 635 PRINTS Flavodoxin signature 97 108 IPR001094 GO:0010181
Arst6g04256 635 PRINTS Flavodoxin signature 135 145 IPR001094 GO:0010181
Arst6g04256 635 PRINTS Flavodoxin signature 49 62 IPR001094 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04256 Arst-Chr6 110703699 110707327 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04256 6 110703699 110707327 Arst6g04256 6 110703699 110707327 ECH