Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst6g04248 | ATGTTTCACCGCCGGAGCAATTCTCATCAAGATCACGAAAACAGCGAGGTTTATGCCGAATCCAAGGTTAAGGAGCTAAAGGGAGCAATGGGACCGTTATCCGGGCGCAGCTTGAAGTACTGCACAGATGCTTGTTTTAAGAGATATTTGGAAGCTCGGAATTGGAATGTAGACAAGTCCAAGAAGATGTTGGAGGATACACTAAATTGGAGATCAACCTATAAGCCTGAGGAGATTCGCTGGCATGAGGTTGCCGTGGAAGGGGAGACAGGGAAACTGTATAGAGCAAATTTTCATGACAGGCAAGGAAGGACTGTTCTTATCTTGAGACCTGGAATGCAGAACACCAAATCAATGGAGAATCAGATGAAGCACTTGGTGTATCTTTTGGAAAATGCAATGCTTAACCTTCCACCAGGTCAAGAACAAATGGCATGGTTGATAGATTTCACTGGCTGGTCATTGACCAATAGCGTGCCAGTTAAGTTGGCCAGAGACACCATCAACACTCTTCAGAATCACTATCCTGAGAGGCTTGCCATTGCATTTCTTTACAATCCTCCAAGAATTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGATACAAAGACATTTGAGAAAGTGAAGTTTGTGTATCCCAAAAACAAAGATAGTGTGGAACTCATGAAGTCTTATTTTGATGATGAGAATCTTCCAAAAGAATTAGGAGGAAAAAGCACTATGAAGTATAACCATGAAGAGTTCTCAAGATTAATGGTTCAAGATGATTTGAAATGTGCAGCATTTTGGGGTCCTGAATCAGAAGTAGCTCCAGATCCAGATTACAATGAAGCCACCTCCATTTGA | 852 | 0.4167 | MFHRRSNSHQDHENSEVYAESKVKELKGAMGPLSGRSLKYCTDACFKRYLEARNWNVDKSKKMLEDTLNWRSTYKPEEIRWHEVAVEGETGKLYRANFHDRQGRTVLILRPGMQNTKSMENQMKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSLTNSVPVKLARDTINTLQNHYPERLAIAFLYNPPRIFEAFWKIVKYFLDTKTFEKVKFVYPKNKDSVELMKSYFDDENLPKELGGKSTMKYNHEEFSRLMVQDDLKCAAFWGPESEVAPDPDYNEATSI | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst6g04248 | 283 | PANTHER | GH16843P | 8 | 270 | - | - | |
| Arst6g04248 | 283 | SMART | sec14_4 | 87 | 242 | IPR001251 | - | |
| Arst6g04248 | 283 | FunFam | Phosphatidylinositol transfer protein 3 | 2 | 274 | - | - | |
| Arst6g04248 | 283 | CDD | SEC14 | 99 | 240 | IPR001251 | - | |
| Arst6g04248 | 283 | Pfam | CRAL/TRIO domain | 90 | 239 | IPR001251 | - | |
| Arst6g04248 | 283 | SUPERFAMILY | CRAL/TRIO domain | 81 | 256 | IPR036865 | - | |
| Arst6g04248 | 283 | ProSiteProfiles | CRAL-TRIO lipid binding domain profile. | 81 | 245 | IPR001251 | - | |
| Arst6g04248 | 283 | SUPERFAMILY | CRAL/TRIO N-terminal domain | 20 | 83 | IPR036273 | - | |
| Arst6g04248 | 283 | Gene3D | - | 3 | 264 | IPR036865 | - | |
| Arst6g04248 | 283 | Pfam | CRAL/TRIO, N-terminal domain | 41 | 66 | IPR011074 | - | |
| Arst6g04248 | 283 | SMART | CRAL_TRIO_N_2 | 42 | 67 | IPR011074 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst6g04248 | Arst-Chr6 | 110586423 | 110589201 | Tandem |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Arst6g04248 | 6 | 110586423 | 110589201 | Arst6g04248 | 6 | 110586423 | 110589201 | ECH |