Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst6g04225 | ATGAATATATTGGCAGGTAATGTTGCATCAGCCACATTATTCACCCTACGAAACAATTGCAAATACAATGTTTGGCCCGGAAGTCTTTCCGGCAATGGCCCAAATATTCTTGACACCGATCTTTCTTTAAGACCCGGTTCTTCGGCCCAATCAAATGTTCCGGCTGGTTGGTCAGGACGTTTTTGGGCTAGAACCGAGTGTAATTTTGATAGGACCGGTAACGGCAAATGTGCTACAGGAGACTGTCTCGGTGGTCTCAAGTGTATCGGCGGAGGTGCTCCGCCGGTAACACTGGCCGAGTTCACGGTTGGAAGTGCCGGCAACGGCAATATGGATTTTTATGATGTGAGCTTGGTAGACGGTTACAATGTTCCTATAGGGATACATGCAACCGGAGGGACCGGTAACTGTCAATATGCTGGTTGCGTTTCTGACCTAAATGATAACTGTCCAAAGGAGTTACAGGTAAAAGATGTTACCGGTTTGGTAGTTGCATGCAAGAGCGCGTGTGCGGCATTCAACAGTCCGGAGTATTGTTGCACCGGGGAGCACGGAACACCACAGACATGCCCACCTACAAATTACTCAAAAATGTTTAAGATTGCATGTCCAAGAGCTTATAGTTATGCTTATGATGATGCTTCGAGCACTTGTACATGTTCTGGAGCAAATTACACCATCACTTTTTGCCCCACAGAATCCTCATAA | 708 | 0.4647 | MNILAGNVASATLFTLRNNCKYNVWPGSLSGNGPNILDTDLSLRPGSSAQSNVPAGWSGRFWARTECNFDRTGNGKCATGDCLGGLKCIGGGAPPVTLAEFTVGSAGNGNMDFYDVSLVDGYNVPIGIHATGGTGNCQYAGCVSDLNDNCPKELQVKDVTGLVVACKSACAAFNSPEYCCTGEHGTPQTCPPTNYSKMFKIACPRAYSYAYDDASSTCTCSGANYTITFCPTESS | 235 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst6g04225 | 235 | Gene3D | Thaumatin | 12 | 231 | IPR037176 | - | |
| Arst6g04225 | 235 | PANTHER | OS03G0233200 PROTEIN | 10 | 231 | IPR001938 | - | |
| Arst6g04225 | 235 | PIRSF | PR5 | 1 | 235 | IPR001938 | - | |
| Arst6g04225 | 235 | Pfam | Thaumatin family | 18 | 231 | IPR001938 | - | |
| Arst6g04225 | 235 | FunFam | Thaumatin-like protein 1a | 12 | 231 | - | - | |
| Arst6g04225 | 235 | CDD | TLP-PA | 14 | 230 | - | - | |
| Arst6g04225 | 235 | PRINTS | Pathogenesis-related protein signature | 60 | 71 | IPR001938 | - | |
| Arst6g04225 | 235 | PRINTS | Pathogenesis-related protein signature | 73 | 102 | IPR001938 | - | |
| Arst6g04225 | 235 | PRINTS | Pathogenesis-related protein signature | 221 | 230 | IPR001938 | - | |
| Arst6g04225 | 235 | PRINTS | Pathogenesis-related protein signature | 13 | 25 | IPR001938 | - | |
| Arst6g04225 | 235 | SMART | tha2 | 14 | 231 | IPR001938 | - | |
| Arst6g04225 | 235 | SUPERFAMILY | Osmotin, thaumatin-like protein | 13 | 231 | IPR037176 | - | |
| Arst6g04225 | 235 | ProSitePatterns | Thaumatin family signature. | 73 | 88 | IPR017949 | - | |
| Arst6g04225 | 235 | ProSiteProfiles | Thaumatin family profile. | 11 | 231 | IPR001938 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst6g04225 | Arst-Chr6 | 110320338 | 110321045 | Dispersed/Tandem |