Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04190 ATGTTGACAAATTCTCTTCCATCAATAATGCAAACCTTGTTAGCATCATCACCCCCTAAATTTCAAGGACCAGATTTGTCCTTAAACATAAGCCCTCCATGTGTTAGTGTCTCAGATTCCGAAAACAACAACCTCAACAACAACAACAACAACATGAACATGAACATGAACATGAACATGTTCCTAAGTAGTAGGAAGAAAATTGTTTACAATGATATAAGTACTAGTTCAACTACTTCAGATTCAGGTGGTAGTAGTTGTGGAAGTGCAAGTGACTTAAGCCATGAAAACAACAACCTTCTTCATCATCAACCTACATTGACCTTAGATTTGAATAATTACCATCATCATCATCAAGGACTTTCTAGAAGCTTCAATAATCACCACCATTTCCAACCTCAAATCTATGGCCGCGAGTTCAAGAGAAGCTCCAGGGTCATTAATGGAGTCAAGAGGAGCGTGAGAGCACCTAGGATGAGATGGACAACAACCCTCCATGCCCATTTTGTTCATGCTGTTCAACTCCTTGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAAAGTCACTTACAGATGTATAGAACAGTGAAGAGCACCGACAAAAGCACAGGTCATGGCCAGACAGATATGGGTTTAATCCCAATGCCAAGGATTAATAATGTTGCTCACTTGCATGCCAATAATGGAGTTTCAGCTTCTCATGATGATAGACCAAATAATTTACCACATCCACCACAAAATTATTCCCAAAGGTCATGGCAATCATCAATAATGGAGGCAAATACAAACAATAGTAGACAAAAACCCCAACTTGGTTTGACGGATTCTCATACAAAGGGATATGAAACCATGGTGGAAGAGCACAATTGTGTGGGCATGTCTAATTGCATGAAGGAGAATAAGTTGGATTCTACTTCATTGTCAAGTTCTGATGAGTTGATGCTTGATCTTGAATTCACCCTTGGAAGGCCAAATTGGGAAAAGGAACATCAAAAGGAGTCATCAAGAGTAGAATTAACCCTTCTCAAATGTTAA 1080 0.3944 MLTNSLPSIMQTLLASSPPKFQGPDLSLNISPPCVSVSDSENNNLNNNNNNMNMNMNMNMFLSSRKKIVYNDISTSSTTSDSGGSSCGSASDLSHENNNLLHHQPTLTLDLNNYHHHHQGLSRSFNNHHHFQPQIYGREFKRSSRVINGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKSTGHGQTDMGLIPMPRINNVAHLHANNGVSASHDDRPNNLPHPPQNYSQRSWQSSIMEANTNNSRQKPQLGLTDSHTKGYETMVEEHNCVGMSNCMKENKLDSTSLSSSDELMLDLEFTLGRPNWEKEHQKESSRVELTLLKC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04190 359 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 24 345 IPR044847 GO:0000976|GO:0006355|GO:0010158
Arst6g04190 359 MobiDBLite consensus disorder prediction 243 267 - -
Arst6g04190 359 MobiDBLite consensus disorder prediction 74 97 - -
Arst6g04190 359 Gene3D - 156 213 - -
Arst6g04190 359 SUPERFAMILY Homeodomain-like 154 211 IPR009057 -
Arst6g04190 359 FunFam Myb family transcription factor 155 213 - -
Arst6g04190 359 Pfam Myb-like DNA-binding domain 158 209 IPR001005 -
Arst6g04190 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 157 210 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04190 Arst-Chr6 109926369 109932640 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst6g04190 Myb_DNA-binding 1.6e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04190 6 109926369 109932640 Arst6g04190 6 109926369 109932640 ECH
Arst6g04190 6 109926369 109932640 Arst8g00377 8 5557976 5561469 PCT