Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04145 ATGACAAGTATTATATCATCCATGGAGAGATCAAAATCATCCATTGATCAAATTCAGCCCCCAACTTATGGAAACTTAATTACCATCCTCAGCATTGATGGAGGTGGTATTAGGGGACTTATCCCAGCAACCATTCTTAATTTCCTTGAATCACAACTTCAGGAGTTGGATGGTGAAGATGTGAGGCTTGCAGATTATTTTGATGTGATATCAGGAACAAGCACTGGAGGTCTTGTAACTGCTATGTTAACTGCTCCAGATAAACATAACCGTCCACTTTTTGCCGCTAAGGATATCAAACCCTTTTACATGGAACACTGCCCAAATATTTTTCCACAACCTAGAGGACTCCGTGGAACATTAATGGCAAAGGTAATAAGACAATTAGGAGGACCAAAATATGATGGAAAATATTTGCATGGAGTGGTTAAAGAGAAACTTGGAAACATTCGTTTGCATGAGACCATCACCAATGTTGTTATTCCCACCTTTGACATCAAAACTTTGCAACCAACTATTTTCTCATCTTACCAGATTAAGAATTCGCCTTGTTTGGATGCAAAATTATCAGACATATGCATTGGCACATCAGCTGCACCAACCTATCTCCCTGCTCACCAATTCACCAACAAAGTTCCAAAAGGAAATGTGCATGAATTCAACCTCATTGATGGTGGTGTTTGTGCCAATAATCCGACTCTAGTTGCTATGAATCAAGTAACAAAGCAAATAATCAACCAGAATGCTGATTTCTTTCCAATAAAGCCTTCAGACTATAGTCGGTTCCTAATAATTTCAATAGGGACTGGGACAGCCAAAAATGAAGAAAAAATGGATGCAAAAATGACAGCTAAATGGGGTTTATTAGATTGGCTAACTCATAGTGGCTCCATTCCTTTAATTGATATTTTTTCTCAATCAAGTTCTGATATGGTTGATTTCCATTTAGCTATAAAATTTAATTATTCTGTTAATTTTTACGAATTGCAGGATGACACGTTGATTGGAAATGATTCTTCAGTTGACATTGCTACTAAGGAGAATTTGGATAGACTTTGCCAAATTGGTGAAAATTTGTTGAAGAAACCAGTTTCTAGGATGAATTTAGAGAATGGTAAAATTGAACCAATTGGAAATGGAGGAACCAATGAAGAAGCACTCAAAAGGTTCGCAAAAATACTTTCACACGAGAGGAGACTCCGTGACATGAGATCCCCTCACACTAAGAAAGCATCTACTACTAAATAG 1248 0.3734 MTSIISSMERSKSSIDQIQPPTYGNLITILSIDGGGIRGLIPATILNFLESQLQELDGEDVRLADYFDVISGTSTGGLVTAMLTAPDKHNRPLFAAKDIKPFYMEHCPNIFPQPRGLRGTLMAKVIRQLGGPKYDGKYLHGVVKEKLGNIRLHETITNVVIPTFDIKTLQPTIFSSYQIKNSPCLDAKLSDICIGTSAAPTYLPAHQFTNKVPKGNVHEFNLIDGGVCANNPTLVAMNQVTKQIINQNADFFPIKPSDYSRFLIISIGTGTAKNEEKMDAKMTAKWGLLDWLTHSGSIPLIDIFSQSSSDMVDFHLAIKFNYSVNFYELQDDTLIGNDSSVDIATKENLDRLCQIGENLLKKPVSRMNLENGKIEPIGNGGTNEEALKRFAKILSHERRLRDMRSPHTKKASTTK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04145 415 Pfam Patatin-like phospholipase 30 237 IPR002641 GO:0006629
Arst6g04145 415 FunFam Patatin 19 406 - -
Arst6g04145 415 Gene3D Cytosolic phospholipase A2 catalytic domain 16 406 - -
Arst6g04145 415 PANTHER XYLOSE ISOMERASE 8 402 - -
Arst6g04145 415 CDD Pat17_isozyme_like 24 372 - -
Arst6g04145 415 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 30 237 IPR002641 GO:0006629
Arst6g04145 415 SUPERFAMILY FabD/lysophospholipase-like 26 370 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04145 Arst-Chr6 109578767 109583009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04145 18 409 Miscellaneous Gene Families AT2G26560 63.038 0.0 509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04145 6 109578767 109583009 Arst6g04145 6 109578767 109583009 ECH