Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04132 ATGCAAGCTGTGGAGAGGCTAGGGAGCTTTATCACCCGCGGAGTTTCGACTGTTTCAATGCCGTTCATCCCTTATGGTGGTGCTGTGGACATTGTTGTAGTTCAACAAAAAGATGGCAGCTTCAAGTCCTCTCCTTGGTTCGTTCGATTCGGGAAACTTCACAGGGTTCTCAAGGCTGATGAGAAGAAGGTTAGCATCAGTGTCAATGGATCCGAAGCCGGTTTCCACATGCACATGAACCATAAAGGGGAAGCCTTCTTTTTGAGGGATACACATTGTGAACAACAAGGGGATGAAGATTCCGGATCTAGCGAATCATCATCGTCCGGCGAAGATGCTGATGTTGTCCTACCATGGGGCAGGAAGAGGAATTTCAAGTCAAAAAGTTGCAAGTTTGATCCGGATGGATCATTTGTAGCTGATATGAATGCCTTAAACAATGATAAGATTGTGGACAGGACTAATTCTCGCGGATCCCGGCTATTTAGGCTTGTGTTGGGGCAAAGGTCCTTCAATGGGGAAGTTGATGAAGATGCAGAAGACTTATTGGAACGTGCTGAGATTGCAGCCAACCTTTTGGACCTCAAGTGGTCTACGAATCTGAAATTCGACCAGCTACCTCGTCGAGAAAGAAAGAACACTAGGGGTGGTACCTTGGAGAATGGTTTACATTCATCAAAGGTTGATGATTTGCATGCTCAGCAAAGGGATTGTTCTCATAGTGTCCTTGATATGTTTGATGTTGCGGACTTTGAAAAGCTACCTAAATTTCAAAAATCTCGCACCATTAGTGTATATCGGCCACATCGAAAAGCCAACAAGGTTAGGGCAGATACCCCAACATCTGAACAGCTAGCATCCTTGAATCTGCAGGAAGGAAGGAACTTGGTAACCTTTCGTTATTCTACAGCTATGTTGGGGACACAGAAGATTGATGCTCGGATATATTTGTGGAAATGGAACACCCGAATAGTGATATCGGATGTGGATGGAACAATTACAAGGTCTGATGTTCTAGGTCAGGTCATGCCTTTAGTCGGAATCGATTGGTCACAAACCGGTGTTGCACATTTATTCTCTGCTATCCAGGATAATGGATACCAACTACTTTTTCTTAGTGCTCGTGCAATTTCTCAAGCCTGTCATACCAGACGATTCCTATTCAACCTTAAACAGGATGGGAAAGTATTACCGGATGGTCCGGTCGTCATTTCCCCGGACGGACTTTTTCCTGCTCTGTATCGAGAAGTTATCCGGCGAGCTCCTCATGAATTCAAAATCGCATGCTTAGAGGAAATAAGGGCACTTTTCCCTCCTGATTGCAATCCATTCTATGCTGGTTTCGGAAATAGGGATACTGATGAACTCAGCTACCTTAAGGTTGGAATCCCTAAAGGAAAAATCTTCATAATCAATCCCAGGGGAGAGATTGCTGTAAATTGTTTCGACGCGCAATCATATCCTTCTCTTCATGCCGTTGTAGATGGAATATTCCCCCCGACAGACTCGTCTGAGCAGGAGGATTTCAATTCATGGAACTGTTTGCGGTTGCCCTCGGTGTCATAA 1566 0.4483 MQAVERLGSFITRGVSTVSMPFIPYGGAVDIVVVQQKDGSFKSSPWFVRFGKLHRVLKADEKKVSISVNGSEAGFHMHMNHKGEAFFLRDTHCEQQGDEDSGSSESSSSGEDADVVLPWGRKRNFKSKSCKFDPDGSFVADMNALNNDKIVDRTNSRGSRLFRLVLGQRSFNGEVDEDAEDLLERAEIAANLLDLKWSTNLKFDQLPRRERKNTRGGTLENGLHSSKVDDLHAQQRDCSHSVLDMFDVADFEKLPKFQKSRTISVYRPHRKANKVRADTPTSEQLASLNLQEGRNLVTFRYSTAMLGTQKIDARIYLWKWNTRIVISDVDGTITRSDVLGQVMPLVGIDWSQTGVAHLFSAIQDNGYQLLFLSARAISQACHTRRFLFNLKQDGKVLPDGPVVISPDGLFPALYREVIRRAPHEFKIACLEEIRALFPPDCNPFYAGFGNRDTDELSYLKVGIPKGKIFIINPRGEIAVNCFDAQSYPSLHAVVDGIFPPTDSSEQEDFNSWNCLRLPSVS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04132 521 PANTHER LIPIN 266 518 IPR026058 -
Arst6g04132 521 SUPERFAMILY HAD-like 316 467 IPR036412 -
Arst6g04132 521 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Arst6g04132 521 SMART lns2 324 480 IPR031315 -
Arst6g04132 521 Pfam LNS2 (Lipin/Ned1/Smp2) 279 499 IPR013209 -
Arst6g04132 521 Coils Coil 521 521 - -
Arst6g04132 521 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04132 Arst-Chr6 109449956 109453402 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04132 6 109449956 109453402 Arst6g04132 6 109449956 109453402 ECH
Arst6g04132 6 109449956 109453402 Arst8g00422 8 6183028 6189056 PCT