Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04131 ATGCCATCACAAGGTAAGGCAGAAAAAAGCATAAAAATGAAAGCGGTGATGGAAGAGCCTCAAGTGAAAGCACCAAAGATGCCAAAGAAGAATGCAATGAAGATAGAGAAGCCTAGTTTCTTTGATCAAATTATGGGTAAAGGAGTGAAGAACATTGGTATGGTGAACTTTGATGAAGAAGAAGATGATGTTAGTGAATGGAACATGCAAGGTGAAAAAACAATCATCCCAATTCACTTTGAGAAGGTATCCTCCCAATTCAATTGGACAGATTTGTTCCCTGAATGGATCGACGAAGAAGAAGAAAGCGATGTTCCATCTTGTCCAGATATTCCCATGCCGGATTTCAATGTGTATCAAAACATGGACATAATTGTGGCGAAGTTGCCATGCAACAATAATAAAGAAGGGTGGGGTAGGAATGTTTATAGGCTACAAGTTCATCTAATTGTGGCAAATTTGGCTGTGAAGAATAAGGGTAAGAGGGATTATGGGAGATTGAAGACTAAGGTTGTTTTTTTAAGCAAGTGTAGGCCAATGTTGGAAATTTTTAGGTGCAATGATTTGGTTAAGAATGATGGTGATTGGTGGTACTATGAGCCTGATTTGAAGAGATTGGAGCAAAAGGTTTCATTGCCTGTTGGATCATGCAAGTTGGCTTTGCCTCTTTGGGAACAAGGGATTGACAAAGTGTATGACACGTCGAAGATTCAAAAAATGGTTACAAAGAATGCAAAAACAAAACGTGAGGCGTACGCTACAGTGCTTCACTCCTCCGACGACTATGTGTGTGGCGCAATAATACTGGCACAAAGCCTCCTCCGAACGGGAACCGAGCGTGACCTAATCCTCCTTCTTGACAACTCCATCTCTGTTGCAAAGCGTCGCGCGCTCTCCGCCTCTGGGTGGAAGATCCGAATCATAACTCGGATCAGAAACCCAAAGGCGGAGAAACACTCCTACAACGAGTACAACTACAGTAAATTTCGGTTGTGGCAGTTAACAGACTATGACAAGGTTATTTTTATTGATGCTGACATTGTTGTTTTGAGGAACCTTGATGTTCTGTTTCATTTTCCACAAATGTCGGCCACTGGGAATGATCAGAGTATATTTAATTCTGGGATTATGGTGATTGAGCCTTCAAATTGCACATTTAATGTGCTGATGGAGAGTAGATATGATATTGTTTCATATAATGGTGGTGACCAAGGTTTCCTTAACGAGATTTTTGTCTGGTGGCACAGGTTACCAAGGAGGGTGAACTACTTGAAGAATTTTTGGGCCAACACAACATTAGAAGCAAGCAAGAAGAACCATCTATTTGGGGCAGAGCCACCAAAGCTATACTCAATACACTACCTTGGATTAAAGCCATGGTATTGTTATAGGGACTATGATTGCAATTGGGACGTTGAGGACCAAAGGGTGTATGCTAGTGACGTGGCACATCATAAGTGGTGGAAGCTGCATGACCAAATGGACAAAAAACTTCAACGCATGTGTAGGCTCACAAAACGACGTCGTACAAACCTCAATTGGGAGAGAAGAAAAGCTTCCAAATTAGGTTTGCCTGATCAACATTGGAAGATTAATATTACGGATCCCAGAAGATCTGGTTCACTTTTGATGAATTAA 1638 0.4133 MPSQGKAEKSIKMKAVMEEPQVKAPKMPKKNAMKIEKPSFFDQIMGKGVKNIGMVNFDEEEDDVSEWNMQGEKTIIPIHFEKVSSQFNWTDLFPEWIDEEEESDVPSCPDIPMPDFNVYQNMDIIVAKLPCNNNKEGWGRNVYRLQVHLIVANLAVKNKGKRDYGRLKTKVVFLSKCRPMLEIFRCNDLVKNDGDWWYYEPDLKRLEQKVSLPVGSCKLALPLWEQGIDKVYDTSKIQKMVTKNAKTKREAYATVLHSSDDYVCGAIILAQSLLRTGTERDLILLLDNSISVAKRRALSASGWKIRIITRIRNPKAEKHSYNEYNYSKFRLWQLTDYDKVIFIDADIVVLRNLDVLFHFPQMSATGNDQSIFNSGIMVIEPSNCTFNVLMESRYDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTLEASKKNHLFGAEPPKLYSIHYLGLKPWYCYRDYDCNWDVEDQRVYASDVAHHKWWKLHDQMDKKLQRMCRLTKRRRTNLNWERRKASKLGLPDQHWKINITDPRRSGSLLMN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04131 545 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 248 499 IPR029044 -
Arst6g04131 545 CDD GT8_Glycogenin 250 494 - -
Arst6g04131 545 FunFam Hexosyltransferase 247 498 - -
Arst6g04131 545 Pfam Glycosyl transferase family 8 255 460 IPR002495 GO:0016757
Arst6g04131 545 SUPERFAMILY Nucleotide-diphospho-sugar transferases 252 500 IPR029044 -
Arst6g04131 545 PANTHER GLYCOGENIN SUBFAMILY MEMBER 138 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04131 Arst-Chr6 109418214 109423792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04131 13 544 Glycosyltransferase AT4G33330 65.485 0.0 717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04131 6 109418214 109423792 Arst6g04131 6 109418214 109423792 ECH
Arst6g04131 6 109418214 109423792 Arst8g00425 8 6203276 6207091 PCT